RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 SIT1Q9Y3P8 196 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 BORCS7-ASMTA0A0B4J1R7 106 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 hCG_38984A0A1B0GV85 526 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 LINC01387J3KSC0 135 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 MSTNO14793 375 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 CELA2AP08217 269 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 MUC1P15941 1255 aaPredicted RBP11.87□□□□□ -0.51
COL6A3-207ENST00000433762 FOLR3P41439 243 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 LPAR6P43657 344 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 P2RY1P47900 373 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 HOXA1P49639 335 aaPredicted RBP11.87□□□□□ -0.51
COL6A3-207ENST00000433762 ABCA11PQ4W5N1 156 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 LIAT1Q6ZQX7 453 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 TMEM45BQ96B21 275 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 C18orf12Q96KH6 178 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 MLXQ9UH92 298 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 KPTNQ9Y664 436 aa11.87□□□□□ -0.51
COL6A3-207ENST00000433762 IGKV1-27A0A075B6S5 117 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 IGHV3-15A0A0B4J1V0 119 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 GPR137BO60478 399 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 PDCD6O75340 191 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 FOLR2P14207 255 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 TMEM33P57088 247 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
COL6A3-207ENST00000433762 GGNQ86UU5 652 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 LINC00518Q8N0U6 118 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 LGI3Q8N145 548 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 DMBX1Q8NFW5 382 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 MRPL24Q96A35 216 aaKnown RBP11.86□□□□□ -0.51
COL6A3-207ENST00000433762 ABHD14BQ96IU4 210 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 ADGRG7Q96K78 797 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 GINS3Q9BRX5 216 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 FAAP24Q9BTP7 215 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 HRH4Q9H3N8 390 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 FBXO9Q9UK97 447 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-207ENST00000433762 TMED3Q9Y3Q3 217 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 ZNF850A8MQ14 1090 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 SIGLEC5O15389 551 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 P04436 131 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 DUSP1P28562 367 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 ARHGDIBP52566 201 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 CARD18P57730 90 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 SIGLEC14Q08ET2 396 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 BOLLQ8N9W6 283 aaKnown RBP11.86□□□□□ -0.51
COL6A3-207ENST00000433762 RTN4IP1Q8WWV3 396 aaPredicted RBP11.86□□□□□ -0.51
COL6A3-207ENST00000433762 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 OR2H1Q9GZK4 316 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 PRDM14Q9GZV8 571 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 RNF122Q9H9V4 155 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 STARD10Q9Y365 291 aa11.86□□□□□ -0.51
COL6A3-207ENST00000433762 STRAPQ9Y3F4 350 aaKnown RBP11.86□□□□□ -0.51
COL6A3-207ENST00000433762 ZNF816-ZNF321PA0A0X1KG74 233 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 B4E171 279 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 FAM157AC9JC47 383 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 LCATP04180 440 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 ZNF32P17041 273 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 TCN2P20062 427 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 TSPAN7P41732 249 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 GLP1RP43220 463 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 AKR1C2P52895 323 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 AKR1C1Q04828 323 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 PDZK1IP1Q13113 114 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 TAF9Q16594 264 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 ZNF774Q6NX45 483 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 AAED1Q7RTV5 226 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 SAXO1Q8IYX7 474 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 OR10AD1Q8NGE0 317 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 FOXB1Q99853 325 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 SULT4A1Q9BR01 284 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 CRLF2Q9HC73 371 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 TRIOO75962 3097 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 CCDC187A0A096LP49 1063 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 PQLC2LA1A4F0 135 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 HTR5AP47898 357 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 MALLQ13021 153 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 SWI5Q1ZZU3 235 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 TRIM61Q5EBN2 209 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 OR2A2Q6IF42 318 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 OR2V1Q8NHB1 315 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 HDHD3Q9BSH5 251 aaPredicted RBP11.85□□□□□ -0.51
COL6A3-207ENST00000433762 SLC2A9Q9NRM0 540 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 FAM86C1Q9NVL1 165 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 COL6A3P12111 3177 aa11.85□□□□□ -0.51
COL6A3-207ENST00000433762 PIGBOS1A0A0B4J2F0 54 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 DUXBA0A1W2PPF3 345 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 FAM230AA0A1W2PPH8 454 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 CDS2O95674 445 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 MBPP02686 304 aaPredicted RBP11.84□□□□□ -0.51
COL6A3-207ENST00000433762 SFTA3P0C7M3 94 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 DANCRP0C864 163 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 NPBWR1P48145 328 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 RBM11P57052 281 aaKnown RBP11.84□□□□□ -0.51
COL6A3-207ENST00000433762 RND3P61587 244 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 HGFACQ04756 655 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 FAM76BQ5HYJ3 339 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 CPNE4Q96A23 557 aaPredicted RBP11.84□□□□□ -0.51
COL6A3-207ENST00000433762 MSI2Q96DH6 328 aaKnown RBP11.84□□□□□ -0.51
COL6A3-207ENST00000433762 ZNF837Q96EG3 531 aaPredicted RBP11.84□□□□□ -0.51
COL6A3-207ENST00000433762 CYYR1Q96J86 154 aa11.84□□□□□ -0.51
COL6A3-207ENST00000433762 C1QTNF5Q9BXJ0 243 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms