RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ACTA2P62736 377 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 ACTG2P63267 376 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 ACTC1P68032 377 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 ACTA1P68133 377 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 TMEM95Q3KNT9 176 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 ZNF322Q6U7Q0 402 aaPredicted RBP11.95□□□□□ -0.5
PRKDC-203ENST00000432581 Q6ZS46 218 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 ZBTB49Q6ZSB9 765 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 Q6ZSR3 168 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 C16orf82Q7Z2V1 217 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 ANGPTL5Q86XS5 388 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 NDNFQ8TB73 568 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 DNAJC9Q8WXX5 260 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 CCDC124Q96CT7 223 aaKnown RBP11.95□□□□□ -0.5
PRKDC-203ENST00000432581 AKR1E2Q96JD6 320 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 SNX22Q96L94 193 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 CEP19Q96LK0 163 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 TTTY10Q9BZA0 68 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 OR52A1Q9UKL2 312 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 HILPDAQ9Y5L2 63 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 SNX5Q9Y5X3 404 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 SESN1Q9Y6P5 492 aa11.95□□□□□ -0.5
PRKDC-203ENST00000432581 IGHV2-26A0A0B4J1V2 119 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 A0A1B0GTI1 187 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 AQP12BA6NM10 295 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 FAM90A22PA8MWA6 464 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 ATP8B1O43520 1251 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 PRKACGP22612 351 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 CXCR4P61073 352 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 GNGT1P63211 74 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 SLC35A2P78381 396 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 IL18R1Q13478 541 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 AQP12AQ8IXF9 295 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 HS3ST5Q8IZT8 346 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 ZNF676Q8N7Q3 588 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 CANT1Q8WVQ1 401 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 PRRG3Q9BZD7 231 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 TSSC4Q9Y5U2 329 aaPredicted RBP11.94□□□□□ -0.5
PRKDC-203ENST00000432581 LINC00312Q9Y6C7 94 aa11.94□□□□□ -0.5
PRKDC-203ENST00000432581 FAM230AA0A1W2PPH8 454 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 MEX3AA1L020 520 aaKnown RBP11.93□□□□□ -0.5
PRKDC-203ENST00000432581 A6NIN4 97 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 DUS4LO95620 317 aaKnown RBP11.93□□□□□ -0.5
PRKDC-203ENST00000432581 PF4P02776 101 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 CCL1P22362 96 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 CALB2P22676 271 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 CRISP1P54107 249 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 SLX4IPQ5VYV7 408 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 TCF23Q7RTU1 214 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 CENPVQ7Z7K6 275 aaPredicted RBP11.93□□□□□ -0.5
PRKDC-203ENST00000432581 SLC35F2Q8IXU6 374 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 TRMT10AQ8TBZ6 339 aaKnown RBP11.93□□□□□ -0.5
PRKDC-203ENST00000432581 CAPSLQ8WWF8 208 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 RCC1LQ96I51 464 aaKnown RBP11.93□□□□□ -0.5
PRKDC-203ENST00000432581 APOL4Q9BPW4 351 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 CLEC7AQ9BXN2 247 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 TMEM133Q9H2Q1 129 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 LIN7BQ9HAP6 207 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 PLEKHA1Q9HB21 404 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 SEBOXQ9HB31 216 aaPredicted RBP11.93□□□□□ -0.5
PRKDC-203ENST00000432581 MTCH1Q9NZJ7 389 aa11.93□□□□□ -0.5
PRKDC-203ENST00000432581 TCRBV4S1A1TA0A5B7 111 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 TMEM82A0PJX8 343 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 ZNF670-ZNF695F2Z2N8 137 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 K7EIL1 84 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 GATBO75879 557 aaKnown RBP11.92□□□□□ -0.5
PRKDC-203ENST00000432581 CLIC3O95833 236 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 JUNBP17275 347 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-203ENST00000432581 HTR1DP28221 377 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 PEX2P28328 305 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 ARHGDIBP52566 201 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 EDDM3AQ14507 147 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 MEPCEQ7L2J0 689 aaKnown RBP11.92□□□□□ -0.5
PRKDC-203ENST00000432581 Q8IYB0 196 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 OR4X2Q8NGF9 303 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 SLAMF9Q96A28 289 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 CADM1Q9BY67 442 aaKnown RBP11.92□□□□□ -0.5
PRKDC-203ENST00000432581 PAPOLBQ9NRJ5 636 aaKnown RBP11.92□□□□□ -0.5
PRKDC-203ENST00000432581 CLN6Q9NWW5 311 aa11.92□□□□□ -0.5
PRKDC-203ENST00000432581 H2AFY2Q9P0M6 372 aaPredicted RBP11.92□□□□□ -0.5
PRKDC-203ENST00000432581 MRM2Q9UI43 246 aaKnown RBP11.92□□□□□ -0.5
PRKDC-203ENST00000432581 F8VVB4 439 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 F8VWA3 439 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 MAGEB4O15481 346 aaPredicted RBP11.91□□□□□ -0.5
PRKDC-203ENST00000432581 PRKYO43930 277 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 HAND1O96004 215 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 GABRR1P24046 479 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 BRS3P32247 399 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 FUT6P51993 359 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 GRK1Q15835 563 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 PLEKHG7Q6ZR37 379 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 CCDC121Q6ZUS5 278 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 EGFL6Q8IUX8 553 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 CCDC54Q8NEL0 328 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 EMG1Q92979 244 aaKnown RBP11.91□□□□□ -0.5
PRKDC-203ENST00000432581 NRBF2Q96F24 287 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 ADGRL4Q9HBW9 690 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 DPM3Q9P2X0 92 aa11.91□□□□□ -0.5
PRKDC-203ENST00000432581 TENM3Q9P273 2699 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms