RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 TAS2R31P59538 309 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 NUTF2P61970 127 aaKnown RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 ELF3P78545 371 aaPredicted RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 EIF4EBP1Q13541 118 aaPredicted RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 ARFRP1Q13795 201 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 ZNF235Q14590 738 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 SPA17Q15506 151 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 C4orf26Q17RF5 130 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 TBC1D28Q2M2D7 210 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 OLIG3Q7RTU3 272 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 LINC01551Q86U37 167 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 WDR31Q8NA23 367 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 GRPEL2Q8TAA5 225 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 STOML3Q8TAV4 291 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 ABHD3Q8WU67 409 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 VAT1Q99536 393 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 MED18Q9BUE0 208 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 PECRQ9BY49 303 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 RAB34Q9BZG1 259 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 POLR2J2Q9GZM3 115 aaKnown RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 POLR2J3Q9H1A7 115 aaKnown RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 CWH43Q9H720 699 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 NIPAL2Q9H841 368 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 B3GNT2Q9NY97 397 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 GLTPQ9NZD2 209 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 WRAP73Q9P2S5 460 aaPredicted RBP1.95□□□□□ -2.1
CLK1-204ENST00000432425 SS18L2Q9UHA2 77 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 OR52A1Q9UKL2 312 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 HHLA2Q9UM44 414 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 TP53TG5Q9Y2B4 290 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 KCNIP3Q9Y2W7 256 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 CNTNAP1P78357 1384 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 PPIP5K1Q6PFW1 1433 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 SYNMO15061 1565 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 ADAMTSL3P82987 1691 aa1.95□□□□□ -2.1
CLK1-204ENST00000432425 IGLV4-60A0A075B6I1 120 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 SPRR5A0A1B0GTR4 108 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 TCRBV9S1A1TA0A576 114 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 VWA8A3KMH1 1905 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR6C6A6NF89 314 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 HACD1B0YJ81 288 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR11H12B2RN74 326 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 ZNF878C9JN71 531 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 M0QYV0 167 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 FCN1O00602 326 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 CDIPTO14735 213 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 DLEU1O43261 78 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 CXCL13O43927 109 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 ALOX12BO75342 701 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 CLDN11O75508 207 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR2J2O76002 312 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 MT-ND4P03905 459 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 HTR1AP08908 422 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 ACSM4P0C7M7 580 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 IFI30P13284 250 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 RCC1P18754 421 aaPredicted RBP1.94□□□□□ -2.1
CLK1-204ENST00000432425 CELP19835 753 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 SERPINA2P20848 420 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 CCR7P32248 378 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 RPS9P46781 194 aaKnown RBP1.94□□□□□ -2.1
CLK1-204ENST00000432425 GABRA4P48169 554 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 RAB13P51153 203 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 STC1P52823 247 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 SLC10A7Q0GE19 358 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 POU6F1Q14863 301 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 GUSBP1Q15486 140 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 PSMD5Q16401 504 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 DEFB115Q30KQ5 88 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 ARHGAP11BQ3KRB8 267 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 PAGE3Q5JUK9 113 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 C9orf84Q5VXU9 1444 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 ZNF518AQ6AHZ1 1483 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 UNQ9370/PRO34162Q6UXP9 181 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 CMC1Q7Z7K0 106 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 GALNT10Q86SR1 603 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 DHRSXQ8N5I4 330 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 ATPAF2Q8N5M1 289 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 METTL13Q8N6R0 699 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 PRELID2Q8N945 189 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 SLC26A10Q8NG04 563 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR11H1Q8NG94 326 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR2Z1Q8NG97 314 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR6K6Q8NGW6 343 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR11H2Q8NH07 326 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR56B4Q8NH76 319 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR5K2Q8NHB8 316 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 SYNPRQ8TBG9 265 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 CD200R1Q8TD46 325 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 HAVCR2Q8TDQ0 301 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 CASTOR1Q8WTX7 329 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 MRPS31Q92665 395 aaKnown RBP1.94□□□□□ -2.1
CLK1-204ENST00000432425 HAUS1Q96CS2 278 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 SMIM12Q96EX1 92 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 OR5B12Q96R08 314 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 WNK3Q9BYP7 1800 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 NXF2Q9GZY0 626 aaKnown RBP1.94□□□□□ -2.1
CLK1-204ENST00000432425 MIXL1Q9H2W2 232 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 MCUBQ9NWR8 336 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 COA4Q9NYJ1 87 aa1.94□□□□□ -2.1
CLK1-204ENST00000432425 TAS2R13Q9NYV9 303 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms