RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 RLN2P04090 185 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 CTSDP07339 412 aaPredicted RBP12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A15PP0C7V4 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A13PP0C7W8 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A14PP0C7W9 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM90A24PP0C7X0 464 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 CCL2P13500 99 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 PSMB6P28072 239 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 RRADP55042 308 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 RAB1AP62820 205 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 IGFL2Q6UWQ7 119 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 DPPA2Q7Z7J5 298 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 ZNF611Q8N823 705 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 TMEM178AQ8NBL3 297 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 DEFB124Q8NES8 71 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 OR1K1Q8NGR3 316 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 OR51F2Q8NH61 342 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 COQ8AQ8NI60 647 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 ST8SIA2Q92186 375 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 MARS2Q96GW9 593 aaKnown RBP12.01□□□□□ -0.49
HOXC4-202ENST00000430889 VRK1Q99986 396 aaPredicted RBP12.01□□□□□ -0.49
HOXC4-202ENST00000430889 CMSS1Q9BQ75 279 aaKnown RBP12.01□□□□□ -0.49
HOXC4-202ENST00000430889 ZNF2Q9BSG1 426 aaPredicted RBP12.01□□□□□ -0.49
HOXC4-202ENST00000430889 DEFB127Q9H1M4 99 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 OPA3Q9H6K4 179 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 CHMP1AQ9HD42 196 aaPredicted RBP12.01□□□□□ -0.49
HOXC4-202ENST00000430889 ST3GAL6Q9Y274 331 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 STARD10Q9Y365 291 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 CSAG2Q9Y5P2 127 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 CACNA1HO95180 2353 aa12.01□□□□□ -0.49
HOXC4-202ENST00000430889 FAM25EA8MYX2 175 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 EEF1E1-BLOC1S5C9J1V9 151 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 ADAP1O75689 374 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 NGFP01138 241 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 IGHG3P01860 377 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 PDGFAP04085 211 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 OR5H8P0DN80 308 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 CD79AP11912 226 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 ARG2P78540 354 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 CYCSP99999 105 aaKnown RBP12□□□□□ -0.49
HOXC4-202ENST00000430889 PRDX4Q13162 271 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 SRSF6Q13247 344 aaKnown RBP12□□□□□ -0.49
HOXC4-202ENST00000430889 CEACAM21Q3KPI0 293 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 LRRC37A5PQ49AS3 106 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 TMEM200AQ86VY9 491 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 POC1AQ8NBT0 407 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 DYRK2Q92630 601 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 CXorf58Q96LI9 332 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 PCDHB16Q9NRJ7 776 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 PRR13Q9NZ81 148 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 DOCK7Q96N67 2140 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 C5orf51A6NDU8 294 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 CRYM-AS1A6NIL9 109 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 MPTX1A8MV57 137 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 ZNHIT1O43257 154 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 ZNF250P15622 560 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 OPRM1P35372 400 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 WNT5AP41221 380 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 NPBWR2P48146 333 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 FBXW9Q5XUX1 488 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 IGF2-ASQ6U949 168 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 SLC25A26Q70HW3 274 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 MCEMP1Q8IX19 187 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 OR1S1Q8NH92 325 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 THAP6Q8TBB0 222 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 PAPOLGQ9BWT3 736 aaKnown RBP12□□□□□ -0.49
HOXC4-202ENST00000430889 NECAP2Q9NVZ3 263 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 RASL12Q9NYN1 266 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 CLCF1Q9UBD9 225 aa12□□□□□ -0.49
HOXC4-202ENST00000430889 SPAARA0A1B0GVQ0 90 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 SLC22A20A6NK97 555 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 LRP3O75074 770 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 SPDEFO95238 335 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 PGAM2P15259 253 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 WT1P19544 449 aaPredicted RBP11.99□□□□□ -0.49
HOXC4-202ENST00000430889 FUT3P21217 361 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 ARPC4P59998 168 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 MALLQ13021 153 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 GUSBP1Q15486 140 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 TMEM211Q6ICI0 200 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 Q6ZS49 121 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 TMPRSS7Q7RTY8 843 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 MRPL21Q7Z2W9 205 aaKnown RBP11.99□□□□□ -0.49
HOXC4-202ENST00000430889 VASH2Q86V25 355 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 CCDC28AQ8IWP9 274 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 ZDHHC23Q8IYP9 409 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 RBPMSQ93062 196 aaKnown RBP11.99□□□□□ -0.49
HOXC4-202ENST00000430889 OR10C1Q96KK4 312 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 LDAHQ9H6V9 325 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 RCC2Q9P258 522 aaKnown RBP11.99□□□□□ -0.49
HOXC4-202ENST00000430889 C14orf166Q9Y224 244 aaKnown RBP11.99□□□□□ -0.49
HOXC4-202ENST00000430889 KCNMB2Q9Y691 235 aa11.99□□□□□ -0.49
HOXC4-202ENST00000430889 TEX13DA0A0J9YY54 714 aaPredicted RBP11.98□□□□□ -0.49
HOXC4-202ENST00000430889 KANTRA0A1W2PQU2 76 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 F8VVB4 439 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 F8VWA3 439 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 I3L521 148 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 NKX2-8O15522 239 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 BCL3P20749 454 aa11.98□□□□□ -0.49
HOXC4-202ENST00000430889 NUBP1P53384 320 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms