RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 P2RY4P51582 365 aa11.12□□□□□ -0.63
CPNE4-201ENST00000429747 OR2B11Q5JQS5 317 aa11.12□□□□□ -0.63
CPNE4-201ENST00000429747 NCMAPQ5T1S8 102 aa11.12□□□□□ -0.63
CPNE4-201ENST00000429747 NECAP1Q8NC96 275 aa11.12□□□□□ -0.63
CPNE4-201ENST00000429747 RHBDD1Q8TEB9 315 aa11.12□□□□□ -0.63
CPNE4-201ENST00000429747 FAM206AQ9NX38 181 aa11.12□□□□□ -0.63
CPNE4-201ENST00000429747 PLXND1Q9Y4D7 1925 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 ZNF816-ZNF321PA0A0X1KG74 233 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 FAM166BA8MTA8 275 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 ZNF705FA8MVS1 300 aaPredicted RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 GEMIN2O14893 280 aaKnown RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 ZNF705DP0CH99 300 aaPredicted RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 ZNF705BP0CI00 300 aaPredicted RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 ICAM2P13598 275 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 CYB561P49447 251 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 FUT6P51993 359 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 FOXK1P85037 733 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 SURF2Q15527 256 aaPredicted RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 C15orf54Q8N8G6 183 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 PHF7Q9BWX1 381 aaPredicted RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 PLEKHF2Q9H8W4 249 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 TMED3Q9Y3Q3 217 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 WSB1Q9Y6I7 421 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 TRPM7Q96QT4 1865 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 ADAM20O43506 726 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 IGKV3-11P04433 115 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 LPAR6P43657 344 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 MECP2P51608 486 aaKnown RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 RBMS3Q6XE24 437 aaKnown RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 MRPL41Q8IXM3 137 aaKnown RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 C1orf87Q8N0U7 546 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 OR56B2PQ8NGI1 322 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 SOX7Q9BT81 388 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 TOLLIPQ9H0E2 274 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 OBP2BQ9NPH6 170 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 A0A1W2PPV4 95 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 ZNF727A8MUV8 499 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 DNASE2O00115 360 aaPredicted RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 NXPH2O95156 264 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 MSMO1Q15800 293 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 PTCRAQ6ISU1 281 aaPredicted RBP11.11□□□□□ -0.63
CPNE4-201ENST00000429747 C12orf49Q9H741 205 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 WBP1LQ9NX94 342 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 LHFPL6Q9Y693 200 aa11.11□□□□□ -0.63
CPNE4-201ENST00000429747 DEGS1O15121 323 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 CBR3O75828 277 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 ACTL6AO96019 429 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 DSCR4P56555 118 aaPredicted RBP11.1□□□□□ -0.63
CPNE4-201ENST00000429747 TLE1Q04724 770 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 BAXQ07812 192 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 WIPI1Q5MNZ9 446 aaPredicted RBP11.1□□□□□ -0.63
CPNE4-201ENST00000429747 ZNF429Q86V71 674 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 ZNF385AQ96PM9 386 aaKnown RBP11.1□□□□□ -0.63
CPNE4-201ENST00000429747 SLC2A9Q9NRM0 540 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 OR6C6A6NF89 314 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 EPOPA6NHQ4 379 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 MFNGO00587 321 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 PDCD6O75340 191 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 SERPINA7P05543 415 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 MST1P26927 711 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 GPM6AP51674 278 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 CLDN15P56746 228 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 ZP4Q12836 540 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 SSX9Q7RTT3 188 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 RPUSD4Q96CM3 377 aaKnown RBP11.1□□□□□ -0.63
CPNE4-201ENST00000429747 DOCK9Q9BZ29 2069 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 ANAPC1Q9H1A4 1944 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 MPTX1A8MV57 137 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 PLAURQ03405 335 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 SMAD4Q13485 552 aaKnown RBP11.1□□□□□ -0.63
CPNE4-201ENST00000429747 RAB35Q15286 201 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 PIGYQ3MUY2 71 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 ZNF787Q6DD87 383 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 LHX4Q969G2 390 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 INTS12Q96CB8 462 aaKnown RBP11.1□□□□□ -0.63
CPNE4-201ENST00000429747 USB1Q9BQ65 265 aaKnown RBP11.1□□□□□ -0.63
CPNE4-201ENST00000429747 UTP23Q9BRU9 249 aaKnown RBP11.1□□□□□ -0.63
CPNE4-201ENST00000429747 CABLES2Q9BTV7 478 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 GAR1Q9NY12 217 aaKnown RBP11.1□□□□□ -0.63
CPNE4-201ENST00000429747 SIT1Q9Y3P8 196 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 TRIOBPQ9H2D6 2365 aa11.1□□□□□ -0.63
CPNE4-201ENST00000429747 FNDC1Q4ZHG4 1894 aaPredicted RBP11.1□□□□□ -0.63
CPNE4-201ENST00000429747 C3orf85A0A1B0GTC6 90 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 ZNF732B4DXR9 585 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 ARF1P84077 181 aaKnown RBP11.09□□□□□ -0.63
CPNE4-201ENST00000429747 OR2T2Q6IF00 324 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 IFI44Q8TCB0 444 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 SLC2A8Q9NY64 477 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.09□□□□□ -0.63
CPNE4-201ENST00000429747 SCAF4O95104 1147 aaKnown RBP11.09□□□□□ -0.63
CPNE4-201ENST00000429747 CTXN2P0C2S0 81 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 RAB4BP61018 213 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 NHLH2Q02577 135 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 RSPO4Q2I0M5 234 aaPredicted RBP11.09□□□□□ -0.63
CPNE4-201ENST00000429747 VASH2Q86V25 355 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 ADPRHL1Q8NDY3 354 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 REG4Q9BYZ8 158 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 PARP11Q9NR21 331 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 GRPP07492 148 aa11.09□□□□□ -0.63
CPNE4-201ENST00000429747 EIF2S3P41091 472 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms