RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 ANKRD55Q3KP44 614 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 PMS2CLQ68D20 193 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 MOB3CQ70IA8 216 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 PGAP1Q75T13 922 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 GPR137CQ8N3F9 429 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 ZDHHC22Q8N966 263 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 OR52H1Q8NGJ2 320 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 ISOC2Q96AB3 205 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 RRNAD1Q96FB5 475 aaKnown RBP7.08□□□□□ -1.28
HPS4-205ENST00000429411 MAGT1Q9H0U3 335 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 ALX4Q9H161 411 aaPredicted RBP7.08□□□□□ -1.28
HPS4-205ENST00000429411 C5orf66Q9H5L9 145 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 KIAA2026Q5HYC2 2103 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 PHF1O43189 567 aaPredicted RBP7.08□□□□□ -1.28
HPS4-205ENST00000429411 IFNA2P01563 188 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 OR5H8P0DN80 308 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 MSR1P21757 451 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 NPBWR1P48145 328 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 PIGPP57054 158 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 TAS2R46P59540 309 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 PLCXD3Q63HM9 321 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 FBXW12Q6X9E4 464 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 VASH2Q86V25 355 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 APCDD1LQ8NCL9 501 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 GJC3Q8NFK1 279 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 FAM213BQ8TBF2 198 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 SECTM1Q8WVN6 248 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 AQP3Q92482 292 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 SPTSSAQ969W0 71 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 PIK3IP1Q96FE7 263 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 UBE2J1Q9Y385 318 aaPredicted RBP7.08□□□□□ -1.28
HPS4-205ENST00000429411 PUS1Q9Y606 427 aaKnown RBP eCLIP7.08□□□□□ -1.28
HPS4-205ENST00000429411 ROS1P08922 2347 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 ARGFXA6NJG6 315 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 TO15178 435 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 C1QL1O75973 258 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 SFT2D2O95562 160 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 RD3LP0DJH9 198 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 KCNJ3P48549 501 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 OR2B8PP59922 312 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 VAMP2P63027 116 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 TGIF1Q15583 401 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 ADAM5Q6NVV9 412 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 PLXDC2Q6UX71 529 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 TMEM108Q6UXF1 575 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 ETV3LQ6ZN32 361 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 D2HGDHQ8N465 521 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 OR10S1Q8NGN2 331 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 RPS4Y2Q8TD47 263 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 FAM131CQ96AQ9 280 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 MRGPRX4Q96LA9 322 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 RASL10BQ96S79 203 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 C12orf57Q99622 126 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 PAPOLGQ9BWT3 736 aaKnown RBP7.08□□□□□ -1.28
HPS4-205ENST00000429411 SLC5A7Q9GZV3 580 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 OCIAD1Q9NX40 245 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 PADI1Q9ULC6 663 aa7.08□□□□□ -1.28
HPS4-205ENST00000429411 NCOA6Q14686 2063 aaPredicted RBP7.08□□□□□ -1.28
HPS4-205ENST00000429411 TTLL8A6PVC2 850 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 LINC00587B1AMM8 73 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 FTCDNL1E5RQL4 147 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 EFNA2O43921 213 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 NPIPB7O75200 414 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 IGFBP3P17936 291 aaPredicted RBP7.07□□□□□ -1.28
HPS4-205ENST00000429411 FSTP19883 344 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 HFEQ30201 348 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 C1orf100Q5SVJ3 147 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 ARHGEF39Q8N4T4 335 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 KDF1Q8NAX2 398 aaPredicted RBP7.07□□□□□ -1.28
HPS4-205ENST00000429411 OR13G1Q8NGZ3 307 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 UBALD1Q8TB05 177 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 SPACA9Q96E40 222 aaPredicted RBP7.07□□□□□ -1.28
HPS4-205ENST00000429411 C2orf50Q96LR7 162 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 OXGR1Q96P68 337 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 C1orf123Q9NWV4 160 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 TINAGQ9UJW2 476 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 AMDHD2Q9Y303 409 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 A0A096LPE4 126 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 A0A1W2PPZ6 126 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 CYC1P08574 325 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 GSTP1P09211 210 aaKnown RBP7.07□□□□□ -1.28
HPS4-205ENST00000429411 ZNF728P0DKX0 622 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 CCL2P13500 99 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 PLA2G5P39877 138 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 WNT5AP41221 380 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 TMEM50BP56557 158 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 SLC35A1P78382 337 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 DHODHQ02127 395 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 ZNF774Q6NX45 483 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 TRAT1Q6PIZ9 186 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 LDLRAD3Q86YD5 345 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 OR2C3Q8N628 320 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 NANPQ8TBE9 248 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 IL1F10Q8WWZ1 152 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 MRPL24Q96A35 216 aaKnown RBP7.07□□□□□ -1.28
HPS4-205ENST00000429411 FBXL17Q9UF56 701 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 CHD6Q8TD26 2715 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 BOD1L1Q8NFC6 3051 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 BORCS7-ASMTA0A0B4J1R7 106 aa7.07□□□□□ -1.28
HPS4-205ENST00000429411 A0A1W2PR77 199 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms