RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 GTF2A1LQ9UNN4 478 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 MAB21L2Q9Y586 359 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 PCDHGB5Q9Y5G0 923 aa7.54□□□□□ -1.2
SMC1A-203ENST00000428014 IGKV1-9A0A0C4DH69 117 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 FUOMA2VDF0 154 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 J3QLW9 94 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 MAGEB4O15481 346 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-203ENST00000428014 SULT1B1O43704 296 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 ZNF737O75373 536 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 KDM4BO94953 1096 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 NXPH2O95156 264 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 ZNF205O95201 554 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 ZNF19P17023 458 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 ZNF20P17024 532 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 AZGP1P25311 298 aaKnown RBP7.53□□□□□ -1.2
SMC1A-203ENST00000428014 PRDX2P32119 198 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 RANBP1P43487 201 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 UBE2E1P51965 193 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 PDZK1IP1Q13113 114 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 GPR50Q13585 617 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 MIDNQ504T8 468 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 YIF1BQ5BJH7 314 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 NHLRC3Q5JS37 347 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 DMKNQ6E0U4 476 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-203ENST00000428014 ASCL4Q6XD76 172 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 LHFPL3Q86UP9 236 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 PHC2Q8IXK0 858 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 ZNF676Q8N7Q3 588 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 ZDHHC22Q8N966 263 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 ADAT3Q96EY9 351 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-203ENST00000428014 SNX22Q96L94 193 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 TBX15Q96SF7 602 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 CCL13Q99616 98 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 C19orf24Q9BVV8 132 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 CDCA4Q9BXL8 241 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 MS4A7Q9GZW8 240 aaPredicted RBP7.53□□□□□ -1.2
SMC1A-203ENST00000428014 PPP1R3EQ9H7J1 279 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 PCDHB16Q9NRJ7 776 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 GPR173Q9NS66 373 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 IL36GQ9NZH8 169 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 MTCH1Q9NZJ7 389 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 ZNF69Q9UC07 566 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 GLS2Q9UI32 602 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 PSORS1C1Q9UIG5 152 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 MMP24Q9Y5R2 645 aa7.53□□□□□ -1.2
SMC1A-203ENST00000428014 TRAV40A0A0B4J280 105 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 IGHV1-69DA0A0B4J2H0 117 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 IGHV3-64DA0A0J9YX35 117 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 CENPVL3A0A0U1RRI6 287 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 RFPL4AA6NLU0 287 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 RFPL4AL1F8VTS6 287 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 H3BUI4 141 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 ZNF780AO75290 641 aaPredicted RBP7.52□□□□□ -1.21
SMC1A-203ENST00000428014 VENTXO95231 258 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 APOL3O95236 402 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 IGHV1-69P01742 117 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 TK1P04183 234 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 FSTP19883 344 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 KCNJ3P48549 501 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 MTCP1P56278 107 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 UBA52P62987 128 aaKnown RBP7.52□□□□□ -1.21
SMC1A-203ENST00000428014 FOXL1Q12952 345 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 DGUOKQ16854 277 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 Q6YL49 198 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 LINC00596Q86U02 117 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 OR8H2Q8N162 312 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 MS4A15Q8N5U1 240 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 FAM216BQ8N7L0 139 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 SSMEM1Q8WWF3 244 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 CYGBQ8WWM9 190 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 TNFRSF14Q92956 283 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 SLC25A28Q96A46 364 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 MRPS24Q96EL2 167 aaKnown RBP7.52□□□□□ -1.21
SMC1A-203ENST00000428014 ANKRD60Q9BZ19 345 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 TTTY10Q9BZA0 68 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 IFT22Q9H7X7 185 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 PAK1IP1Q9NWT1 392 aaPredicted RBP7.52□□□□□ -1.21
SMC1A-203ENST00000428014 DHDHQ9UQ10 334 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 ZNF281Q9Y2X9 895 aa7.52□□□□□ -1.21
SMC1A-203ENST00000428014 SF3B6Q9Y3B4 125 aaKnown RBP7.52□□□□□ -1.21
SMC1A-203ENST00000428014 DSCAML1Q8TD84 2053 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 IGKV1-27A0A075B6S5 117 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 TRBV5-5A0A0J9YX44 114 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 C17orf98A8MV24 154 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 SYNGR1O43759 233 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 MRPS14O60783 128 aaKnown RBP7.51□□□□□ -1.21
SMC1A-203ENST00000428014 HKR1P10072 659 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 RAB3AP20336 220 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 EEF1B2P24534 225 aaKnown RBP7.51□□□□□ -1.21
SMC1A-203ENST00000428014 MAPK3P27361 379 aaPredicted RBP7.51□□□□□ -1.21
SMC1A-203ENST00000428014 MTNR1BP49286 362 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 WNT4P56705 351 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 ZP1P60852 638 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 RPL31P62899 125 aaKnown RBP7.51□□□□□ -1.21
SMC1A-203ENST00000428014 ST3GAL4Q11206 333 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 IL13RA2Q14627 380 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 KISS1Q15726 138 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 SLC25A26Q70HW3 274 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 FAM58AQ8N1B3 248 aa7.51□□□□□ -1.21
SMC1A-203ENST00000428014 BOLLQ8N9W6 283 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms