RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 LIPFP07098 398 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 PGA5P0DJD9 388 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 SOX2P48431 317 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 ACTG1P63261 375 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 KLRD1Q13241 179 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 SCGB2A2Q13296 93 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 CCDC58Q4VC31 144 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 RNLSQ5VYX0 342 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 DMKNQ6E0U4 476 aaPredicted RBP10.47□□□□□ -0.73
GPC1-204ENST00000426280 CRIP3Q6Q6R5 217 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 C12orf54Q6X4T0 127 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 SLC36A1Q7Z2H8 476 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 VMO1Q7Z5L0 202 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 POC1AQ8NBT0 407 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 OR13C3Q8NGS6 347 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 ZNF671Q8TAW3 534 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 H1FXQ92522 213 aaKnown RBP10.47□□□□□ -0.73
GPC1-204ENST00000426280 GCDHQ92947 438 aaPredicted RBP10.47□□□□□ -0.73
GPC1-204ENST00000426280 TNFRSF14Q92956 283 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 TMIGD2Q96BF3 282 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 SMIM19Q96E16 107 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 JMJD8Q96S16 334 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 MND1Q9BWT6 205 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 COMMD4Q9H0A8 199 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 PLEKHA1Q9HB21 404 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 SIRT7Q9NRC8 400 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 MTCH1Q9NZJ7 389 aa10.47□□□□□ -0.73
GPC1-204ENST00000426280 IGHV1-69DA0A0B4J2H0 117 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 A0A0U1RQK1 487 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 ANKRD61A6NGH8 418 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 RNASEK-C17orf49H0YIS7 233 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 J3QT63 122 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 NOS1APO75052 506 aaPredicted RBP10.46□□□□□ -0.73
GPC1-204ENST00000426280 ECDO95905 644 aaPredicted RBP10.46□□□□□ -0.73
GPC1-204ENST00000426280 IGHV1-69P01742 117 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 CALCBP10092 127 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 CELP19835 753 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 COMPP49747 757 aaPredicted RBP10.46□□□□□ -0.73
GPC1-204ENST00000426280 ERVK11-1P61568 191 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 SPHARQ15513 63 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 MED22Q15528 200 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 AWAT1Q58HT5 328 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 HCP5Q6MZN7 132 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 Q6YL49 198 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 PRSS48Q7RTY5 328 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 C11orf42Q8N5U0 333 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 PNLDC1Q8NA58 520 aaKnown RBP10.46□□□□□ -0.73
GPC1-204ENST00000426280 HAVCR2Q8TDQ0 301 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 GHSRQ92847 366 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 SDSLQ96GA7 329 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 PGLYRP3Q96LB9 341 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 NRIP2Q9BQI9 281 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 HES4Q9HCC6 221 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 C19orf12Q9NSK7 152 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 ONECUT1Q9UBC0 465 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 IL36RNQ9UBH0 155 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 SLC25A10Q9UBX3 287 aaPredicted RBP10.46□□□□□ -0.73
GPC1-204ENST00000426280 BLOC1S6Q9UL45 172 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 LRRC42Q9Y546 428 aa10.46□□□□□ -0.73
GPC1-204ENST00000426280 TENM1Q9UKZ4 2725 aa10.46□□□□□ -0.74
GPC1-204ENST00000426280 MEX3AA1L020 520 aaKnown RBP10.45□□□□□ -0.74
GPC1-204ENST00000426280 DHRS7CA6NNS2 312 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 RNASE1P07998 156 aaKnown RBP10.45□□□□□ -0.74
GPC1-204ENST00000426280 MELTFP08582 738 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 HKR1P10072 659 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 ZNF20P17024 532 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 NDUFB7P17568 137 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 OMGP23515 440 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 MPZP25189 248 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 PRDX2P32119 198 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 GABARAPL2P60520 117 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 IL13RA1P78552 427 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 LRRC10Q5BKY1 277 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 GPR157Q5UAW9 335 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 METTL11BQ5VVY1 283 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 ASPHD2Q6ICH7 369 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 RBMS3Q6XE24 437 aaKnown RBP10.45□□□□□ -0.74
GPC1-204ENST00000426280 CCDC54Q8NEL0 328 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 C8orf46Q8TAG6 207 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 TSEN15Q8WW01 171 aaKnown RBP10.45□□□□□ -0.74
GPC1-204ENST00000426280 ITFG2Q969R8 447 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 ORAI1Q96D31 301 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 MED30Q96HR3 178 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 CHST5Q9GZS9 411 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 DNTTIP1Q9H147 329 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 DHDHQ9UQ10 334 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 ZNF281Q9Y2X9 895 aa10.45□□□□□ -0.74
GPC1-204ENST00000426280 HSMCR30P0CW71 290 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 PAX6P26367 422 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 NPBWR2P48146 333 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 TAS2R43P59537 309 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 RPS11P62280 158 aaKnown RBP eCLIP10.44□□□□□ -0.74
GPC1-204ENST00000426280 RELBQ01201 579 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 ZNF573Q86YE8 665 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 TMEM185AQ8NFB2 350 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 OR4M1Q8NGD0 313 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 OR13C9Q8NGT0 318 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 C17orf50Q8WW18 174 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 SLAMF9Q96A28 289 aa10.44□□□□□ -0.74
GPC1-204ENST00000426280 AJUBAQ96IF1 538 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms