RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 TLX3O43711 291 aaPredicted RBP14.08□□□□□ -0.16
PKP4-205ENST00000426248 DUS4LO95620 317 aaKnown RBP14.08□□□□□ -0.16
PKP4-205ENST00000426248 ACAA2P42765 397 aaKnown RBP14.08□□□□□ -0.16
PKP4-205ENST00000426248 SULT1A2P50226 295 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 BIVMQ86UB2 503 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 COMMD1Q8N668 190 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 RAB39BQ96DA2 213 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 ST6GALNAC5Q9BVH7 336 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 FRRS1LQ9P0K9 344 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 DNAH14Q0VDD8 3507 aa14.08□□□□□ -0.16
PKP4-205ENST00000426248 H3BQ15 152 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 FCGR3AP08637 254 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 TMEM33P57088 247 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 TAS2R31P59538 309 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 FOXF1Q12946 379 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 HIST3H2BBQ8N257 126 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 ZPLD1Q8TCW7 415 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 SMIM8Q96KF7 97 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 NOL4LQ96MY1 436 aaPredicted RBP14.07□□□□□ -0.16
PKP4-205ENST00000426248 WFIKKN1Q96NZ8 548 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 INTS1Q8N201 2190 aaKnown RBP14.07□□□□□ -0.16
PKP4-205ENST00000426248 H0YL77 283 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 XRCC2O43543 280 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 HNF1AP20823 631 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 OMGP23515 440 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 HEPN1Q6WQI6 88 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 PRSS35Q8N3Z0 413 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 Q8WTZ3 238 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 FER1L6-AS2Q96M78 137 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 DCBLD2Q96PD2 775 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 RARRES2Q99969 163 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 TAS2R4Q9NYW5 299 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 TRAV36DV7A0A075B6V5 113 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 SDCBPO00560 298 aaPredicted RBP14.07□□□□□ -0.16
PKP4-205ENST00000426248 RPLP1P05386 114 aaKnown RBP14.07□□□□□ -0.16
PKP4-205ENST00000426248 GNB3P16520 340 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 ZNF43P17038 809 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 SLC2A5P22732 501 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 DLK1P80370 383 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 FOXC1Q12948 553 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 FNDC9Q8TBE3 224 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 EMC6Q9BV81 110 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 WDR54Q9H977 334 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 ELOVL3Q9HB03 270 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 CYTL1Q9NRR1 136 aa14.07□□□□□ -0.16
PKP4-205ENST00000426248 ZNF878C9JN71 531 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 AMY2BP19961 511 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 SSPNQ14714 243 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 FAM189A2Q15884 450 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 BATF2Q8N1L9 274 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 GPR137CQ8N3F9 429 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 ZNF664Q8N3J9 261 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 LRRC18Q8N456 261 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 MOGAT1Q96PD6 335 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 B4GALT7Q9UBV7 327 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 KLK13Q9UKR3 277 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 FAM166BA8MTA8 275 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 SLC16A7O60669 478 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 CXCL1P09341 107 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 PGA3P0DJD8 388 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 GLO1Q04760 184 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 PMS2P11Q13670 270 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 ZNF429Q86V71 674 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 OR13C3Q8NGS6 347 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 FRZBQ92765 325 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 NTNG2Q96CW9 530 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 RNF126Q9BV68 326 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 ZNF724A8MTY0 619 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 NPIPA2E9PIF3 369 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 NPIPA3F8WFD2 350 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 ZFP62Q8NB50 900 aaPredicted RBP14.06□□□□□ -0.16
PKP4-205ENST00000426248 OR5T1Q8NG75 326 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 PLCE1Q9P212 2302 aa14.06□□□□□ -0.16
PKP4-205ENST00000426248 F8VVB4 439 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 F8VWA3 439 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 SIAH2O43255 324 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 ZNRF4Q8WWF5 429 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 TMEM208Q9BTX3 173 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 TUBA4BQ9H853 241 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 C14orf166Q9Y224 244 aaKnown RBP14.05□□□□□ -0.16
PKP4-205ENST00000426248 CST2P09228 141 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 CLRN1P58418 232 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 SLC35A1P78382 337 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 RPL18Q07020 188 aaKnown RBP14.05□□□□□ -0.16
PKP4-205ENST00000426248 POMT1Q9Y6A1 747 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 TAAR5O14804 337 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 CSTBP04080 98 aaKnown RBP14.05□□□□□ -0.16
PKP4-205ENST00000426248 TMEM123Q8N131 208 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 CABLES2Q9BTV7 478 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 SLCO5A1Q9H2Y9 848 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.05□□□□□ -0.16
PKP4-205ENST00000426248 ATXN7O15265 892 aaPredicted RBP14.05□□□□□ -0.16
PKP4-205ENST00000426248 DIRAS3O95661 229 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 HGFACQ04756 655 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 KLHL24Q6TFL4 600 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 BTNL8Q6UX41 500 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 SSX7Q7RTT5 188 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 OR5H2Q8NGV7 314 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 M1APQ8TC57 530 aa14.05□□□□□ -0.16
PKP4-205ENST00000426248 LRFN3Q9BTN0 628 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms