RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CCDC54Q8NEL0 328 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CEP19Q96LK0 163 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ZNF488Q96MN9 340 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 OR8B4Q96RC9 309 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 TEAD3Q99594 435 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 NIPSNAP1Q9BPW8 284 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 GAL3ST2Q9H3Q3 398 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 GPR173Q9NS66 373 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 NUFIP1Q9UHK0 495 aaKnown RBP9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 LINC00312Q9Y6C7 94 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SESN1Q9Y6P5 492 aa9.87□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ARRDC5A6NEK1 342 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 DHRS7CA6NNS2 312 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ODF3BA8MYP8 253 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 GATBO75879 557 aaKnown RBP9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 OCM2P0CE71 109 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 OCMP0CE72 109 aaPredicted RBP9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 NHLRC4P0CG21 123 aaPredicted RBP9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ATP6V1B2P21281 511 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 GABRR1P24046 479 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CEBPDP49716 269 aaPredicted RBP9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 FUT6P51993 359 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ROM1Q03395 351 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 TRIM25Q14258 630 aaKnown RBP9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 EDDM3AQ14507 147 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 KPNB1Q14974 876 aaKnown RBP9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 C9orf152Q5JTZ5 239 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CCDC144NLQ6NUI1 221 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 TRPM8Q7Z2W7 1104 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 OR8H2Q8N162 312 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 BORCS8Q96FH0 119 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CHID1Q9BWS9 393 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 TMEM133Q9H2Q1 129 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 NEK6Q9HC98 313 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 KRT84Q9NSB2 600 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 FAM206AQ9NX38 181 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 DNAJB9Q9UBS3 223 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SNX5Q9Y5X3 404 aa9.86□□□□□ -0.83
HLA-DQB3-203ENST00000425319 TRGV10A0A0A0MS01 117 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PQLC2LA1A4F0 135 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ZNF670-ZNF695F2Z2N8 137 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 K7EIL1 84 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SNX3O60493 162 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 FAM106CPP0CH98 169 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SLC6A1P30531 599 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CDK5Q00535 292 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 GRK1Q15835 563 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ABCA11PQ4W5N1 156 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 DMRTC1Q5HYR2 192 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ABHD12Q8N2K0 398 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 TRMT10AQ8TBZ6 339 aaKnown RBP9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 DNAJC9Q8WXX5 260 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 MYDGFQ969H8 173 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 FGF23Q9GZV9 251 aaPredicted RBP9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 TVP23BQ9NYZ1 205 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 OR52A1Q9UKL2 312 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ARL2BPQ9Y2Y0 163 aa9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 UBE2J1Q9Y385 318 aaPredicted RBP9.85□□□□□ -0.83
HLA-DQB3-203ENST00000425319 IGHV2-26A0A0B4J1V2 119 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ADARB2-AS1A8MUL3 147 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 FAM90A22PA8MWA6 464 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 B2RBV5 119 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SH2D1BO14796 132 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 MGST3O14880 152 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 KRT8P05787 483 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 LPLP06858 475 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 VSIG8P0DPA2 414 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 MPZP25189 248 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 LMO1P25800 156 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 HCCSP53701 268 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ATP1B3P54709 279 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SLC35B1P78383 322 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ZNF322Q6U7Q0 402 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ANGPTL5Q86XS5 388 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ELMOD2Q8IZ81 293 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 DYNAPQ8N1N2 210 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 EMG1Q92979 244 aaKnown RBP9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 CNN2Q99439 309 aaKnown RBP9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 B9D2Q9BPU9 175 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ZNF649Q9BS31 505 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SLC25A33Q9BSK2 321 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 SEBOXQ9HB31 216 aaPredicted RBP9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 HES4Q9HCC6 221 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PCDHB16Q9NRJ7 776 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 ZFP57Q9NU63 452 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 TAS2R1Q9NYW7 299 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 R4GMQ9 66 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 V9GYS6 101 aa9.84□□□□□ -0.83
HLA-DQB3-203ENST00000425319 PSMB11A5LHX3 300 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 NUDT19A8MXV4 375 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 OOSP1A8MZH6 123 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 SYT7O43581 403 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 RAMP3O60896 148 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 OR2F2O95006 317 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 HAND1O96004 215 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 TTRP02766 147 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 MRPL3P09001 348 aaKnown RBP9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 DLX6P56179 175 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 CDC42P60953 191 aa9.83□□□□□ -0.84
HLA-DQB3-203ENST00000425319 OR4D6Q8NGJ1 314 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms