RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 DMRTC1Q5HYR2 192 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 TIMM23BQ5SRD1 257 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 TRAPPC6BQ86SZ2 158 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 SEMA6DQ8NFY4 1073 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 SPSB4Q96A44 273 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 C10orf35Q96D05 121 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 C1orf147Q96MC9 270 aaPredicted RBP12.91□□□□□ -0.34
CALD1-206ENST00000424922 CITED4Q96RK1 184 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 CDH20Q9HBT6 801 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 JKAMPQ9P055 326 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 OPN4Q9UHM6 478 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 hCG_38984A0A1B0GV85 526 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 PRSS44E7EML9 344 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 F5H5P2 479 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 M0QYG6 137 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 ST8SIA5O15466 376 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 ALDH3B1P43353 468 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 MALLQ13021 153 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 GK2Q14410 553 aaPredicted RBP12.91□□□□□ -0.34
CALD1-206ENST00000424922 HLXQ14774 488 aaPredicted RBP12.91□□□□□ -0.34
CALD1-206ENST00000424922 RNASE10Q5GAN6 216 aaKnown RBP12.91□□□□□ -0.34
CALD1-206ENST00000424922 CHST4Q8NCG5 386 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 LPAR5Q9H1C0 372 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 POFUT1Q9H488 388 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 ZMAT3Q9HA38 289 aaKnown RBP12.91□□□□□ -0.34
CALD1-206ENST00000424922 ELOVL5Q9NYP7 299 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 GHRLQ9UBU3 117 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 ANAPC10Q9UM13 185 aa12.91□□□□□ -0.34
CALD1-206ENST00000424922 NOS1APO75052 506 aaPredicted RBP12.9□□□□□ -0.34
CALD1-206ENST00000424922 MPC2O95563 127 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 OR4E1P0C645 316 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 GLIPR1L1Q6UWM5 242 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 ZDHHC22Q8N966 263 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 OR13C8Q8NGS7 320 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 TNFAIP8L1Q8WVP5 186 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 SLC6A7Q99884 636 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 DPCDQ9BVM2 203 aaPredicted RBP12.9□□□□□ -0.34
CALD1-206ENST00000424922 CHST6Q9GZX3 395 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 PLEKHA6Q9Y2H5 1048 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 AUP1Q9Y679 476 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 ZFYVE26Q68DK2 2539 aa12.9□□□□□ -0.34
CALD1-206ENST00000424922 CFAP46Q8IYW2 2715 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 TUBAL3A6NHL2 446 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 DHRS7CA6NNS2 312 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 M0R233 179 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 CECR9P0C854 216 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 NFYAP23511 347 aaPredicted RBP12.89□□□□□ -0.35
CALD1-206ENST00000424922 OPCMLQ14982 345 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 PNLIPRP3Q17RR3 467 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
CALD1-206ENST00000424922 C12orf45Q8N5I9 185 aaPredicted RBP12.89□□□□□ -0.35
CALD1-206ENST00000424922 STEAP2Q8NFT2 490 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 PP6455Q8WZ26 134 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 MARC2Q969Z3 335 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 MUCL1Q96DR8 90 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 REPIN1Q9BWE0 567 aaKnown RBP12.89□□□□□ -0.35
CALD1-206ENST00000424922 UBQLN2Q9UHD9 624 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 ZNF98A6NK75 572 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 MCRIP1C9JLW8 97 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 IGLV1-44P01699 117 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 FCER2P06734 321 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 HCKP08631 526 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 SSTR2P30874 369 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 ZNF83P51522 516 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 H2BFSP57053 126 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 PPA1Q15181 289 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 OR8B8Q15620 311 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 GRK1Q15835 563 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 TOR2AQ5JU69 321 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 FAM209BQ5JX69 171 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 CLLU1Q5K131 121 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 MRPL21Q7Z2W9 205 aaKnown RBP12.89□□□□□ -0.35
CALD1-206ENST00000424922 CMBLQ96DG6 245 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 CHST5Q9GZS9 411 aa12.89□□□□□ -0.35
CALD1-206ENST00000424922 IGHV1-18A0A0C4DH31 117 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 IGKV1-9A0A0C4DH69 117 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 C16orf97H3BN30 126 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 L7N2F9 121 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 GOSR2O14653 212 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 CDC14BO60729 498 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 SMPD2O60906 423 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 CXCL2P19875 107 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 CCKARP32238 428 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 SEC61A1P61619 476 aaKnown RBP12.88□□□□□ -0.35
CALD1-206ENST00000424922 SRSF4Q08170 494 aaKnown RBP12.88□□□□□ -0.35
CALD1-206ENST00000424922 EXOSC2Q13868 293 aaKnown RBP12.88□□□□□ -0.35
CALD1-206ENST00000424922 UBE2V2Q15819 145 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 C2orf68Q2NKX9 166 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 ANKRD39Q53RE8 183 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 SPATA46Q5T0L3 261 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 C22orf34Q6ZV56 151 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 OR56B1Q8NGI3 324 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 OR5L1Q8NGL2 311 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 NPRL2Q8WTW4 380 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 ELMOD3Q96FG2 381 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 CCDC120Q96HB5 630 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 SPACA5Q96QH8 159 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 URM1Q9BTM9 101 aaKnown RBP12.88□□□□□ -0.35
CALD1-206ENST00000424922 SELENOIQ9C0D9 397 aa12.88□□□□□ -0.35
CALD1-206ENST00000424922 IFT46Q9NQC8 304 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms