RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 MBD3L5A6NJ08 208 aaPredicted RBP3.07□□□□□ -1.92
TOP2A-201ENST00000423485 ZNF724A8MTY0 619 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 HTR2CP28335 458 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 PMELP40967 661 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 RPL15P61313 204 aaKnown RBP3.07□□□□□ -1.92
TOP2A-201ENST00000423485 MEF2CQ06413 473 aaPredicted RBP3.07□□□□□ -1.92
TOP2A-201ENST00000423485 FOXF1Q12946 379 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 SQSTM1Q13501 440 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 ANKRD22Q5VYY1 191 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 CLEC6AQ6EIG7 209 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 PET117Q6UWS5 81 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 Q6ZT83 130 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 ZNF627Q7L945 461 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 VTCN1Q7Z7D3 282 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 TMEM252Q8N6L7 170 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 CCDC71LQ8N9Z2 235 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 SETD9Q8NE22 299 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 OR9Q2Q8NGE9 314 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 OR4Q3Q8NH05 313 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 WFDC5Q8TCV5 224 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 NUDCD2Q8WVJ2 157 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 RAB40CQ96S21 281 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 HOPXQ9BPY8 73 aaPredicted RBP3.07□□□□□ -1.92
TOP2A-201ENST00000423485 CLEC7AQ9BXN2 247 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 VSIG4Q9Y279 399 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 KCNIP3Q9Y2W7 256 aa3.07□□□□□ -1.92
TOP2A-201ENST00000423485 IGKV3-7A0A075B6H7 116 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 A0A1W2PN81 502 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 RAB19A4D1S5 217 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 CEBPZOSA8MTT3 80 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 TGFBR3LH3BV60 316 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 SDCBPO00560 298 aaPredicted RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 MAFKO60675 156 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 APOL3O95236 402 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 RLN2P04090 185 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 RBMY1A1P0DJD3 496 aaKnown RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 FUT1P19526 365 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 ANOS1P23352 680 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 CHRNA7P36544 502 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 GNG10P50151 68 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 DAD1P61803 113 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 MESP2Q0VG99 397 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 UNC119Q13432 240 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 AWAT1Q58HT5 328 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 KRBOX4Q5JUW0 171 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 CORO6Q6QEF8 472 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 UQCC3Q6UW78 93 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 GOLGA7Q7Z5G4 137 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 SLC22A18ASQ8N1D0 253 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 CLIP4Q8N3C7 705 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 SEMA6DQ8NFY4 1073 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 ZNF675Q8TD23 568 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 FGGYQ96C11 551 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 STACQ99469 402 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 ISYNA1Q9NPH2 558 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 SLC17A5Q9NRA2 495 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 PRSS37A4D1T9 235 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 LRRC3CA6NJW4 275 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 NDUFB2O95178 105 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 SERPINE2P07093 398 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 RRASP10301 218 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 SNRPBP14678 240 aaKnown RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 HIST1H1BP16401 226 aaKnown RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 FUT3P21217 361 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 GCSHP23434 173 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 SLC6A1P30531 599 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 CSF2RBP32927 897 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 MYCNOSP40205 109 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 RORCP51449 518 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 ZNF415Q09FC8 603 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 TOMM34Q15785 309 aaPredicted RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 TM4SF20Q53R12 229 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 NCMAPQ5T1S8 102 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 REEP3Q6NUK4 255 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 C16orf82Q7Z2V1 217 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 ISCA2Q86U28 154 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 DTX1Q86Y01 620 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 FAM58AQ8N1B3 248 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 C12orf45Q8N5I9 185 aaPredicted RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 PQLC3Q8N755 202 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 NHLRC2Q8NBF2 726 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 OR5B12Q96R08 314 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 METTL26Q96S19 204 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 ACER3Q9NUN7 267 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 ADAMTS6Q9UKP5 1117 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 UBE2J1Q9Y385 318 aaPredicted RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 TRGV2A0A075B6R0 118 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 TEX13DA0A0J9YY54 714 aaPredicted RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 ZC3H12DA2A288 527 aaKnown RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 OR11H12B2RN74 326 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 M0R3H8 397 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 PRAF2O60831 178 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 SCGNO76038 276 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 HLA-DQB1P01920 261 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 IGFBP1P08833 259 aaPredicted RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 SLC2A2P11168 524 aaPredicted RBP3.06□□□□□ -1.92
TOP2A-201ENST00000423485 NR4A1P22736 598 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 PKIAP61925 76 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 ROM1Q03395 351 aa3.06□□□□□ -1.92
TOP2A-201ENST00000423485 MGAT2Q10469 447 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms