RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 NOX4Q9NPH5 578 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 DUX4Q9UBX2 424 aa13.1□□□□□ -0.31
BRAT1-202ENST00000421712 POLR3KQ9Y2Y1 108 aaPredicted RBP13.1□□□□□ -0.31
BRAT1-202ENST00000421712 PPIAL4CA0A0B4J2A2 164 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 F8VVB4 439 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 F8VWA3 439 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 J3QLI3 93 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 KNG1P01042 644 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 SELLP14151 372 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 SRD5A1P18405 259 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 AMY2BP19961 511 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 NPBWR2P48146 333 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 CEBPDP49716 269 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-202ENST00000421712 SNU13P55769 128 aaKnown RBP13.09□□□□□ -0.31
BRAT1-202ENST00000421712 RIPPLY3P57055 190 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 EMX1Q04741 257 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-202ENST00000421712 TBCEQ15813 527 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-202ENST00000421712 ASPHD2Q6ICH7 369 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 ZNF529Q6P280 563 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 BTN2A1Q7KYR7 527 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 FAM58AQ8N1B3 248 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 TMEM185AQ8NFB2 350 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 TNFAIP8L1Q8WVP5 186 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 GAFA1Q96PS6 74 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 DERL3Q96Q80 235 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 HES4Q9HCC6 221 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 ACOT13Q9NPJ3 140 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 RBFOX1Q9NWB1 397 aaKnown RBP13.09□□□□□ -0.31
BRAT1-202ENST00000421712 SLC25A10Q9UBX3 287 aaPredicted RBP13.09□□□□□ -0.31
BRAT1-202ENST00000421712 GLS2Q9UI32 602 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 LRRC42Q9Y546 428 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 INSIG2Q9Y5U4 225 aa13.09□□□□□ -0.31
BRAT1-202ENST00000421712 TRBV5-7A0A0A0MS05 114 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 IGHV2-70DA0A0C4DH43 119 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 SIGLEC5O15389 551 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 ENSAO43768 121 aaKnown RBP13.08□□□□□ -0.32
BRAT1-202ENST00000421712 ECDO95905 644 aaPredicted RBP13.08□□□□□ -0.32
BRAT1-202ENST00000421712 MAS1P04201 325 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 ALDOBP05062 364 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 CPEP16870 476 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 PRKACAP17612 351 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 ZNF93P35789 620 aaPredicted RBP13.08□□□□□ -0.32
BRAT1-202ENST00000421712 ERVK11-1P61568 191 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 TPBGQ13641 420 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 INSL4Q14641 139 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 DGUOKQ16854 277 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 ARMCX4Q5H9R4 360 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 CEACAM19Q7Z692 300 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 FGFRL1Q8N441 504 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 CD177Q8N6Q3 437 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 PNLDC1Q8NA58 520 aaKnown RBP13.08□□□□□ -0.32
BRAT1-202ENST00000421712 ZSCAN4Q8NAM6 433 aaPredicted RBP13.08□□□□□ -0.32
BRAT1-202ENST00000421712 ZNRF1Q8ND25 227 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 S100A13Q99584 98 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 NKX3-1Q99801 234 aaPredicted RBP13.08□□□□□ -0.32
BRAT1-202ENST00000421712 TMPRSS13Q9BYE2 586 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 TCF7L1Q9HCS4 588 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 ING4Q9UNL4 249 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 FOXJ3Q9UPW0 622 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 AUP1Q9Y679 476 aa13.08□□□□□ -0.32
BRAT1-202ENST00000421712 FN1P02751 2386 aaKnown RBP13.08□□□□□ -0.32
BRAT1-202ENST00000421712 TRAV8-7A0A075B6U6 113 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 C22orf46C9J442 243 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 GABRPO00591 440 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 IGFBP3P17936 291 aaPredicted RBP13.07□□□□□ -0.32
BRAT1-202ENST00000421712 DUSP1P28562 367 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 TRAM1Q15629 374 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 SAXO1Q8IYX7 474 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 SPARTQ8N0X7 666 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 ZNF561Q8N587 486 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 TEX29Q8N6K0 151 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 ZNF222Q9UK12 451 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 GSTK1Q9Y2Q3 226 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 MAB21L2Q9Y586 359 aa13.07□□□□□ -0.32
BRAT1-202ENST00000421712 IGKV1-12A0A0C4DH73 117 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 KIR2DS1A0A191URI9 304 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 GPR37O15354 613 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 PIN1P1O15428 100 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 GPX5O75715 221 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 KDM4BO94953 1096 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 AVPP01185 164 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 IGKV1D-12P01611 117 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 LIPFP07098 398 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 CHRM2P08172 466 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 ADRA2CP18825 462 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 FSTP19883 344 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 PSMB9P28065 219 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 PTGFRP43088 359 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 ZP1P60852 638 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 RPS25P62851 125 aaKnown RBP13.06□□□□□ -0.32
BRAT1-202ENST00000421712 COL10A1Q03692 680 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 RSU1Q15404 277 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 ZNF773Q6PK81 442 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 PHC2Q8IXK0 858 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 JAGN1Q8N5M9 183 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 ASCC1Q8N9N2 400 aaKnown RBP13.06□□□□□ -0.32
BRAT1-202ENST00000421712 NANPQ8TBE9 248 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 SDSLQ96GA7 329 aa13.06□□□□□ -0.32
BRAT1-202ENST00000421712 NR1H4Q96RI1 486 aaPredicted RBP13.06□□□□□ -0.32
BRAT1-202ENST00000421712 METRNQ9UJH8 293 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms