RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 OR7C1O76099 320 aaPredicted RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 NXPH2O95156 264 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 IGHV3-13P01766 116 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 THBDP07204 575 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 AKAIN1P0CW23 69 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 PRKACAP17612 351 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 TBPP20226 339 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 BCL3P20749 454 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 BLVRBP30043 206 aaPredicted RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 CD200P41217 278 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 SRP9P49458 86 aaKnown RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 FABP6P51161 128 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 TAS2R19P59542 299 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 FGF12P61328 243 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 IFITM3Q01628 133 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF154Q13106 437 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 IKZF1Q13422 519 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 DYRK1AQ13627 763 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 KLF9Q13886 244 aaPredicted RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 OXA1LQ15070 435 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 ZMYND11Q15326 602 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 TESK1Q15569 626 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 PCGF3Q3KNV8 242 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 PIGYQ3MUY2 71 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 MOGAT2Q3SYC2 334 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 NHLRC3Q5JS37 347 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 OLFML2AQ68BL7 652 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 ELP2Q6IA86 826 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 CRIP3Q6Q6R5 217 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 ASCL4Q6XD76 172 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 DCDC5Q6ZRR9 648 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 CALHM1Q8IU99 346 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 FBXL14Q8N1E6 418 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 OR2Z1Q8NG97 314 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 NEK7Q8TDX7 302 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 GPX8Q8TED1 209 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 NUDCD2Q8WVJ2 157 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 AQP3Q92482 292 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 PLPPR2Q96GM1 343 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 POM121Q96HA1 1249 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 ABHD1Q96SE0 405 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 DIRC2Q96SL1 478 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 FGF23Q9GZV9 251 aaPredicted RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 C11orf54Q9H0W9 315 aaPredicted RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 DPAGT1Q9H3H5 408 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 FN3KRPQ9HA64 309 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 C12orf4Q9NQ89 552 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF701Q9NV72 531 aaPredicted RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 RBFOX1Q9NWB1 397 aaKnown RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 TAAR3PQ9P1P4 343 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 COPZ2Q9P299 210 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 MTFP1Q9UDX5 166 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF107Q9UII5 783 aaPredicted RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 DUSP13Q9UII6 198 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 ST3GAL6Q9Y274 331 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 PLEKHA6Q9Y2H5 1048 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 RBMX2Q9Y388 322 aaKnown RBP5.08□□□□□ -1.6
HMGB3-202ENST00000419110 FAM208BQ5VWN6 2430 aa5.08□□□□□ -1.6
HMGB3-202ENST00000419110 hCG_2014768A0A024R1R8 64 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 A0A0A6YYD4 124 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 IGKV1-12A0A0C4DH73 117 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 ANKRD20A5PA0PJZ0 165 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 MEIS3P1A6NDR6 274 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 PRSS44E7EML9 344 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 F5H5P2 479 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 SYNGR1O43759 233 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 ZG16O60844 167 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 CA11O75493 328 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 IGKV1D-12P01611 117 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 SFTPBP07988 381 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 PGA5P0DJD9 388 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 GNB3P16520 340 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 AMY2BP19961 511 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 CD33P20138 364 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 CHATP28329 748 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 MDH2P40926 338 aaKnown RBP5.07□□□□□ -1.6
HMGB3-202ENST00000419110 ZNF81P51508 661 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 SNU13P55769 128 aaKnown RBP5.07□□□□□ -1.6
HMGB3-202ENST00000419110 TAS2R46P59540 309 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 SNRPD2P62316 118 aaKnown RBP5.07□□□□□ -1.6
HMGB3-202ENST00000419110 MEF2DQ14814 521 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 TAF9Q16594 264 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 ALKBH6Q3KRA9 238 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 RNASE10Q5GAN6 216 aaKnown RBP5.07□□□□□ -1.6
HMGB3-202ENST00000419110 SPIN3Q5JUX0 258 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 NCMAPQ5T1S8 102 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 RSBN1Q5VWQ0 802 aaPredicted RBP5.07□□□□□ -1.6
HMGB3-202ENST00000419110 PRAMEF6Q5VXH4 476 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 PLET1Q6UQ28 207 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 MOB1BQ7L9L4 216 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 RNF144BQ7Z419 303 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 C1QL2Q7Z5L3 287 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 NRARPQ7Z6K4 114 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 WDR86Q86TI4 376 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 FAM58AQ8N1B3 248 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 FAM89BQ8N5H3 189 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 CELF2-AS1Q8N7Q2 184 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 POC1AQ8NBT0 407 aa5.07□□□□□ -1.6
HMGB3-202ENST00000419110 SCCPDHQ8NBX0 429 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms