RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 DGUOKQ16854 277 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 ATPAF1Q5TC12 328 aaPredicted RBP10.36□□□□□ -0.75
SKA1-203ENST00000417656 DDI2Q5TDH0 399 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 FAHD2BQ6P2I3 314 aaPredicted RBP10.36□□□□□ -0.75
SKA1-203ENST00000417656 SATL1Q86VE3 508 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 MKXQ8IYA7 352 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 SVOPQ8N4V2 548 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 CD177Q8N6Q3 437 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 FAHD2AQ96GK7 314 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 MGLLQ99685 303 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 TMPRSS13Q9BYE2 586 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 FAM192AQ9GZU8 254 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 DNTTIP1Q9H147 329 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 ELL3Q9HB65 397 aaPredicted RBP10.36□□□□□ -0.75
SKA1-203ENST00000417656 ISYNA1Q9NPH2 558 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 NOX4Q9NPH5 578 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 CKLFQ9UBR5 152 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 OR14J1Q9UGF5 321 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 CDC42EP3Q9UKI2 254 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 INSIG2Q9Y5U4 225 aa10.36□□□□□ -0.75
SKA1-203ENST00000417656 LOC105371242A0A075B767 164 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 PPIAL4CA0A0B4J2A2 164 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 J3QLI3 93 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 SIGLEC5O15389 551 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 MAGEB3O15480 346 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 NDUFB3O43676 98 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 MRPS14O60783 128 aaKnown RBP10.35□□□□□ -0.75
SKA1-203ENST00000417656 KNG1P01042 644 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 AVPP01185 164 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 TMEM225BP0DP42 221 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 CPEP16870 476 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 HOXB4P17483 251 aaPredicted RBP10.35□□□□□ -0.75
SKA1-203ENST00000417656 HNF1AP20823 631 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 MAPK3P27361 379 aaPredicted RBP10.35□□□□□ -0.75
SKA1-203ENST00000417656 BDKRB2P30411 391 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 OR3A4PP47883 348 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 EMX1Q04741 257 aaPredicted RBP10.35□□□□□ -0.75
SKA1-203ENST00000417656 TPBGQ13641 420 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 CHRFAM7AQ494W8 412 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 KCTD21Q4G0X4 260 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 FAM27D1Q5T7N8 215 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 ZNF773Q6PK81 442 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 Q8IYB0 196 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 SPARTQ8N0X7 666 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 TMEM185AQ8NFB2 350 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 TNFAIP8L1Q8WVP5 186 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 THRSPQ92748 146 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 TMEM203Q969S6 136 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 DACT3Q96B18 629 aaPredicted RBP10.35□□□□□ -0.75
SKA1-203ENST00000417656 CPNE2Q96FN4 548 aaPredicted RBP10.35□□□□□ -0.75
SKA1-203ENST00000417656 GPER1Q99527 375 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 YTHDF1Q9BYJ9 559 aaKnown RBP10.35□□□□□ -0.75
SKA1-203ENST00000417656 TMEM138Q9NPI0 162 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 LPAR3Q9UBY5 353 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 MAB21L2Q9Y586 359 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 DOCK11Q5JSL3 2073 aa10.35□□□□□ -0.75
SKA1-203ENST00000417656 NF1P21359 2839 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 ENSAO43768 121 aaKnown RBP10.34□□□□□ -0.75
SKA1-203ENST00000417656 GPX5O75715 221 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 KDM4BO94953 1096 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 MAS1P04201 325 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 ALDOBP05062 364 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 PRKACAP17612 351 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 ADRA2CP18825 462 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 GATA3P23771 443 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 PRDX2P32119 198 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 TGFBR2P37173 567 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 GPR50Q13585 617 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 SSX1Q16384 188 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 ACSM3Q53FZ2 586 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 LRRC10Q5BKY1 277 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 BTNL3Q6UXE8 466 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 C1orf229Q6ZS94 237 aaPredicted RBP10.34□□□□□ -0.75
SKA1-203ENST00000417656 BTN2A1Q7KYR7 527 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 PHC2Q8IXK0 858 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 SAXO1Q8IYX7 474 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 FAM58AQ8N1B3 248 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 MS4A15Q8N5U1 240 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 ZNRF1Q8ND25 227 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 RAB40AQ8WXH6 277 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 H1FXQ92522 213 aaKnown RBP10.34□□□□□ -0.75
SKA1-203ENST00000417656 SDSLQ96GA7 329 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 MED30Q96HR3 178 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 NUDT16L1Q9BRJ7 211 aaKnown RBP10.34□□□□□ -0.75
SKA1-203ENST00000417656 BEX2Q9BXY8 128 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 C7orf69Q9H7B7 122 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 SLC25A10Q9UBX3 287 aaPredicted RBP10.34□□□□□ -0.75
SKA1-203ENST00000417656 OPN4Q9UHM6 478 aa10.34□□□□□ -0.75
SKA1-203ENST00000417656 WNK2Q9Y3S1 2297 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 SC5DO75845 299 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 RGS9O75916 674 aaPredicted RBP10.33□□□□□ -0.76
SKA1-203ENST00000417656 SFTPBP07988 381 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 NDUFB7P17568 137 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 PSMB9P28065 219 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 DUSP1P28562 367 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 ZNF93P35789 620 aaPredicted RBP10.33□□□□□ -0.76
SKA1-203ENST00000417656 SRP14P37108 136 aaKnown RBP10.33□□□□□ -0.76
SKA1-203ENST00000417656 CAPZA1P52907 286 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 GP2P55259 537 aaKnown RBP10.33□□□□□ -0.76
SKA1-203ENST00000417656 ARMCX4Q5H9R4 360 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms