RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 ZNF573Q86YE8 665 aa11.35□□□□□ -0.59
SCAF8-203ENST00000417268 ADAT1Q9BUB4 502 aaKnown RBP11.35□□□□□ -0.59
SCAF8-203ENST00000417268 RNF212BA8MTL3 300 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 CXCL2P19875 107 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 INSM1Q01101 510 aaPredicted RBP11.34□□□□□ -0.59
SCAF8-203ENST00000417268 AWAT1Q58HT5 328 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 PHYHD1Q5SRE7 291 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 NCR3LG1Q68D85 454 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 OR8U1Q8NH10 309 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 OR4F5Q8NH21 305 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 OR4F4Q96R69 305 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 SEC11CQ9BY50 192 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 PCM1Q15154 2024 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 A0A1B0GTH9 108 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 FAM74A7A6NL05 159 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 METTL15P1P0C7V9 234 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 ZNF17P17021 662 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 PCK2Q16822 640 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 FAM74A3Q4VXF1 159 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 DRAM2Q6UX65 266 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 CMBLQ96DG6 245 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 FAM221AA4D161 298 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 TSPAN2O60636 221 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 TUSC2O75896 110 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 C1QCP02747 245 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 CDKN2AP42771 156 aaKnown RBP11.34□□□□□ -0.59
SCAF8-203ENST00000417268 ZNF85Q03923 595 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 CATR1Q13166 79 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 SLC17A5Q9NRA2 495 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 V9GYS6 101 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 MED19A0JLT2 244 aaPredicted RBP11.34□□□□□ -0.59
SCAF8-203ENST00000417268 ZNF66Q6ZN08 573 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 CA5BP1Q8WTZ4 195 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 MRPS18BQ9Y676 258 aaKnown RBP11.34□□□□□ -0.59
SCAF8-203ENST00000417268 WSB1Q9Y6I7 421 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 WDR81Q562E7 1941 aa11.34□□□□□ -0.59
SCAF8-203ENST00000417268 TMEM272A0A1B0GTI8 110 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 LOC105371267A0A1B0GV96 52 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 IGHA1P01876 353 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 TLE1Q04724 770 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 DMRTC1Q5HYR2 192 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 RPL7L1Q6DKI1 246 aaKnown RBP11.33□□□□□ -0.6
SCAF8-203ENST00000417268 RGS7BPQ6MZT1 257 aaPredicted RBP11.33□□□□□ -0.6
SCAF8-203ENST00000417268 LHFPL2Q6ZUX7 228 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 LSRQ86X29 649 aaPredicted RBP11.33□□□□□ -0.6
SCAF8-203ENST00000417268 OR51F2Q8NH61 342 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 TMEM37Q8WXS4 190 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 ZNF816-ZNF321PA0A0X1KG74 233 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 IGKV1D-16P01601 117 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 ZFP36L2P47974 494 aaKnown RBP11.33□□□□□ -0.6
SCAF8-203ENST00000417268 IGLV3-21P80748 117 aaPredicted RBP11.33□□□□□ -0.6
SCAF8-203ENST00000417268 LSM11P83369 360 aaKnown RBP eCLIP11.33□□□□□ -0.66e-11■■■■■ 44.4
SCAF8-203ENST00000417268 C21orf62-AS1Q17RA5 79 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 SSX7Q7RTT5 188 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 BATF2Q8N1L9 274 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 GPX8Q8TED1 209 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 SEC14L6B5MCN3 397 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 TIAF1O95411 115 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 F12P00748 615 aaPredicted RBP11.33□□□□□ -0.6
SCAF8-203ENST00000417268 CELA2AP08217 269 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 TMPRSS3P57727 454 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 WDR38Q5JTN6 314 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 MARVELD3Q96A59 401 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 CTHRC1Q96CG8 243 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 SAT2Q96F10 170 aaPredicted RBP11.33□□□□□ -0.6
SCAF8-203ENST00000417268 FAM103A1Q9BTL3 118 aaKnown RBP11.33□□□□□ -0.6
SCAF8-203ENST00000417268 RAB18Q9NP72 206 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 ZNF391Q9UJN7 358 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 LRP12Q9Y561 859 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 DEGS1O15121 323 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 CSRP1P21291 193 aaKnown RBP11.33□□□□□ -0.6
SCAF8-203ENST00000417268 EDDM3BP56851 147 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 PLGLAQ15195 96 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 Q3ZCU0 254 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 SLC25A30Q5SVS4 291 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 ZDHHC23Q8IYP9 409 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 PP6455Q8WZ26 134 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 ZNF426Q9BUY5 554 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 ZNF586Q9NXT0 402 aa11.33□□□□□ -0.6
SCAF8-203ENST00000417268 LSM2Q9Y333 95 aaKnown RBP11.33□□□□□ -0.6
SCAF8-203ENST00000417268 C7orf77A4D0Y5 90 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 CST7O76096 145 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 DUS4LO95620 317 aaKnown RBP11.32□□□□□ -0.6
SCAF8-203ENST00000417268 HEXAP06865 529 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 ACAA2P42765 397 aaKnown RBP11.32□□□□□ -0.6
SCAF8-203ENST00000417268 RPL29P47914 159 aaKnown RBP11.32□□□□□ -0.6
SCAF8-203ENST00000417268 ZNF90Q03938 601 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 VAMP3Q15836 100 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 PRSS54Q6PEW0 395 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 CISD2Q8N5K1 135 aaKnown RBP11.32□□□□□ -0.6
SCAF8-203ENST00000417268 OR11H4Q8NGC9 324 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 ANGPTL4Q9BY76 406 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 IL17BQ9UHF5 180 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 G3V3Q6 166 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 EDN3P14138 238 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 CTLA4P16410 223 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 NTF3P20783 257 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 ASCL1P50553 236 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 IQCJQ1A5X6 159 aa11.32□□□□□ -0.6
SCAF8-203ENST00000417268 DAZAP1Q96EP5 407 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms