RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ZNF676Q8N7Q3 588 aa12.28□□□□□ -0.44
DDX56-202ENST00000415758 NDNFQ8TB73 568 aa12.28□□□□□ -0.44
DDX56-202ENST00000415758 ASB17Q8WXJ9 295 aa12.28□□□□□ -0.44
DDX56-202ENST00000415758 SNX22Q96L94 193 aa12.28□□□□□ -0.44
DDX56-202ENST00000415758 CLEC7AQ9BXN2 247 aa12.28□□□□□ -0.44
DDX56-202ENST00000415758 TMEM133Q9H2Q1 129 aa12.28□□□□□ -0.44
DDX56-202ENST00000415758 GPR173Q9NS66 373 aa12.28□□□□□ -0.44
DDX56-202ENST00000415758 ZNF446Q9NWS9 450 aa12.28□□□□□ -0.44
DDX56-202ENST00000415758 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.28□□□□□ -0.44
DDX56-202ENST00000415758 LINC00312Q9Y6C7 94 aa12.28□□□□□ -0.44
DDX56-202ENST00000415758 TMEM14AQ9Y6G1 99 aa12.28□□□□□ -0.44
DDX56-202ENST00000415758 A0A1B0GTI1 187 aa12.27□□□□□ -0.45
DDX56-202ENST00000415758 TMEM82A0PJX8 343 aa12.27□□□□□ -0.45
DDX56-202ENST00000415758 OSMP13725 252 aa12.27□□□□□ -0.45
DDX56-202ENST00000415758 HOXD3P31249 432 aaPredicted RBP12.27□□□□□ -0.45
DDX56-202ENST00000415758 RIDAP52758 137 aaKnown RBP12.27□□□□□ -0.45
DDX56-202ENST00000415758 RPS7P62081 194 aaKnown RBP12.27□□□□□ -0.45
DDX56-202ENST00000415758 MFGE8Q08431 387 aaPredicted RBP12.27□□□□□ -0.45
DDX56-202ENST00000415758 OR4P4Q8NGL7 312 aa12.27□□□□□ -0.45
DDX56-202ENST00000415758 OR14K1Q8NGZ2 314 aa12.27□□□□□ -0.45
DDX56-202ENST00000415758 MOB1AQ9H8S9 216 aa12.27□□□□□ -0.45
DDX56-202ENST00000415758 ARL8BQ9NVJ2 186 aa12.27□□□□□ -0.45
DDX56-202ENST00000415758 MTCH1Q9NZJ7 389 aa12.27□□□□□ -0.45
DDX56-202ENST00000415758 F8VVB4 439 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 F8VWA3 439 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 OR2F2O95006 317 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 AMY1AP04745 511 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 AMY2AP04746 511 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 LPLP06858 475 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 BRS3P32247 399 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 APOFQ13790 326 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 TRIM25Q14258 630 aaKnown RBP12.26□□□□□ -0.45
DDX56-202ENST00000415758 ABCA11PQ4W5N1 156 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 C10orf99Q6UWK7 81 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 DHFR2Q86XF0 187 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 MRPL41Q8IXM3 137 aaKnown RBP12.26□□□□□ -0.45
DDX56-202ENST00000415758 ELMOD2Q8IZ81 293 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 ARHGAP24Q8N264 748 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 DPF1Q92782 380 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 CEP19Q96LK0 163 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 RBM14Q96PK6 669 aaKnown RBP12.26□□□□□ -0.45
DDX56-202ENST00000415758 DPM3Q9P2X0 92 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 HHLA2Q9UM44 414 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 COPS3Q9UNS2 423 aa12.26□□□□□ -0.45
DDX56-202ENST00000415758 NHLRC4P0CG21 123 aaPredicted RBP12.25□□□□□ -0.45
DDX56-202ENST00000415758 RAP2AP10114 183 aa12.25□□□□□ -0.45
DDX56-202ENST00000415758 BDH1Q02338 343 aa12.25□□□□□ -0.45
DDX56-202ENST00000415758 ETV3LQ6ZN32 361 aa12.25□□□□□ -0.45
DDX56-202ENST00000415758 TMEM179BQ7Z7N9 219 aa12.25□□□□□ -0.45
DDX56-202ENST00000415758 RTN4RL2Q86UN3 420 aa12.25□□□□□ -0.45
DDX56-202ENST00000415758 OSR2Q8N2R0 312 aa12.25□□□□□ -0.45
DDX56-202ENST00000415758 OR52N4Q8NGI2 321 aa12.25□□□□□ -0.45
DDX56-202ENST00000415758 CAPSLQ8WWF8 208 aa12.25□□□□□ -0.45
DDX56-202ENST00000415758 STMN2Q93045 179 aa12.25□□□□□ -0.45
DDX56-202ENST00000415758 SLC25A33Q9BSK2 321 aa12.25□□□□□ -0.45
DDX56-202ENST00000415758 MCRIP2Q9BUT9 160 aaKnown RBP12.25□□□□□ -0.45
DDX56-202ENST00000415758 CCDC182A6NF36 153 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 LOC110117498-PIK3R3F6TDL0 507 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 MMP23AO75900 390 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 CST1P01037 141 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 IGLV1-47P01700 117 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 CCL1P22362 96 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 CD24P25063 80 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 PEX2P28328 305 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 ERP29P30040 261 aaKnown RBP12.24□□□□□ -0.45
DDX56-202ENST00000415758 ACTR3P61158 418 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 ESRRGP62508 458 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 MS4A2Q01362 244 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 EDDM3AQ14507 147 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 HSP90B2PQ58FF3 399 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 OR52W1Q6IF63 320 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 ABHD12Q8N2K0 398 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 OR51D1Q8NGF3 324 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 SLC25A19Q9HC21 320 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 MED4Q9NPJ6 270 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 ZMAT5Q9UDW3 170 aaKnown RBP12.24□□□□□ -0.45
DDX56-202ENST00000415758 OR52A1Q9UKL2 312 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 IKZF2Q9UKS7 526 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 SLC7A11Q9UPY5 501 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 UBE2J1Q9Y385 318 aaPredicted RBP12.24□□□□□ -0.45
DDX56-202ENST00000415758 R4GMQ9 66 aa12.24□□□□□ -0.45
DDX56-202ENST00000415758 FAM230AA0A1W2PPH8 454 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 A6NIN4 97 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 LEUTXA8MZ59 168 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 M0QZK8 103 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 PSPNO60542 156 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 IGHA1P01876 353 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 MRPL3P09001 348 aaKnown RBP12.23□□□□□ -0.45
DDX56-202ENST00000415758 SLC6A1P30531 599 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 THBS3P49746 956 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 MNAT1P51948 309 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 ARHGDIBP52566 201 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 GRK1Q15835 563 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 BCL2L15Q5TBC7 163 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 SLX4IPQ5VYV7 408 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 TMEM236Q5W0B7 351 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 EGFL6Q8IUX8 553 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 ENTHD1Q8IYW4 607 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 TPRX1Q8N7U7 411 aa12.23□□□□□ -0.45
DDX56-202ENST00000415758 TRMT10AQ8TBZ6 339 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms