RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 NPBWR2P48146 333 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 TMEM50BP56557 158 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 RBM11P57052 281 aaKnown RBP12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 ASAH1Q13510 395 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 ARFRP1Q13795 201 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 IL13RA2Q14627 380 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 EFNB3Q15768 340 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 TAF9Q16594 264 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 TRIM16LQ309B1 348 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 RNASE12Q5GAN4 147 aaKnown RBP12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 WDR86Q86TI4 376 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 POC1AQ8NBT0 407 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 DEDD2Q8WXF8 326 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 MEGF10Q96KG7 1140 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 OR2V2Q96R30 315 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 C7orf50Q9BRJ6 194 aaKnown RBP12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 TMEM204Q9BSN7 226 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 PECRQ9BY49 303 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 SPACA1Q9HBV2 294 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 DYNLRB1Q9NP97 96 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 FAIMQ9NVQ4 179 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 C1orf123Q9NWV4 160 aa12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 DIDO1Q9BTC0 2240 aaKnown RBP12.1□□□□□ -0.47
HMGA1P1-201ENST00000415560 A0A0A6YYD4 124 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 LINC00854A0A1B0GVQ3 168 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 hCG_1807616A0A1W2PRN6 198 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 H7C417 338 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 GEMIN2O14893 280 aaKnown RBP12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 ORC5O43913 435 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 CA11O75493 328 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 RHBDL1O75783 438 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 NXPH2O95156 264 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 PTBP3O95758 552 aaKnown RBP12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 IGHV1-46P01743 117 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 GNB3P16520 340 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 FUT3P21217 361 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 FAUP35544 74 aaKnown RBP12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 GDNFP39905 211 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 PMELP40967 661 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 GATA4P43694 442 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 DYRK1AQ13627 763 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 DAZAP2Q15038 168 aaPredicted RBP12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 PCGF3Q3KNV8 242 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 NKAPLQ5M9Q1 402 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 ATAD3CQ5T2N8 411 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 PRAMEF6Q5VXH4 476 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 DNM1P46Q6ZS02 220 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 C11orf53Q8IXP5 236 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 OR11L1Q8NGX0 322 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 GPX8Q8TED1 209 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 SEH1LQ96EE3 360 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 ARHGAP5-AS1Q96IT6 56 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 ZMAT3Q9HA38 289 aaKnown RBP12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 DECR2Q9NUI1 292 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 UFSP2Q9NUQ7 469 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 RBFOX1Q9NWB1 397 aaKnown RBP12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 MTFP1Q9UDX5 166 aa12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 KLF2Q9Y5W3 355 aaPredicted RBP12.09□□□□□ -0.47
HMGA1P1-201ENST00000415560 TMEM235A6NFC5 223 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 NAP1L6A6NFF2 107 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 FOXI3A8MTJ6 420 aaPredicted RBP12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 SH2D1BO14796 132 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 PDCD6O75340 191 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 OR7C1O76099 320 aaPredicted RBP12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 PTTG1O95997 202 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 PLAUP00749 431 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 GLAP06280 429 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 CD55P08174 381 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 IRF2P14316 349 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 GLRA1P23415 457 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 CFHR2P36980 270 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 ERVK11-1P61568 191 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 SNRPD2P62316 118 aaKnown RBP12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 RBM39Q14498 530 aaKnown RBP12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 TESK1Q15569 626 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 PIGYQ3MUY2 71 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 PLAC9Q5JTB6 97 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 SPIN3Q5JUX0 258 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 FAM209AQ5JX71 171 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 MUC15Q8N387 334 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 ITLN1Q8WWA0 313 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 FBXW5Q969U6 566 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 NRIP2Q9BQI9 281 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 IFT46Q9NQC8 304 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 KLK11Q9UBX7 282 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 RBMX2Q9Y388 322 aaKnown RBP12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 USP24Q9UPU5 2620 aa12.08□□□□□ -0.48
HMGA1P1-201ENST00000415560 MEIOCA2RUB1 952 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 WIPF3A6NGB9 483 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 VGLL3A8MV65 326 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 MCRIP1C9JLW8 97 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 MFNGO00587 321 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 DEGS1O15121 323 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 LYRM1O43325 122 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 PTHLHP12272 177 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 RCVRNP35243 200 aa12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 SNU13P55769 128 aaKnown RBP12.07□□□□□ -0.48
HMGA1P1-201ENST00000415560 TAS2R19P59542 299 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms