RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 CNOT4O95628 575 aaKnown RBP10.05□□□□□ -0.8
RFFL-205ENST00000415395 B4GALT1P15291 398 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 GNB3P16520 340 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 PTGER4P35408 488 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 OR3A2P47893 321 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 SLC6A9P48067 706 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 GUSBP1Q15486 140 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 FAM74A3Q4VXF1 159 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 C10orf91Q5T1B1 145 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 OR52W1Q6IF63 320 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 UNQ6126/PRO20091Q6UXV3 157 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 DOK3Q7L591 496 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 COMMD2Q86X83 199 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 LINC00518Q8N0U6 118 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 GVQW1Q8N7I0 195 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 CCDC54Q8NEL0 328 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 MARCH1Q8TCQ1 289 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 AQP10Q96PS8 301 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 OCSTAMPQ9BR26 566 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 PLEK2Q9NYT0 353 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 TUBD1Q9UJT1 453 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 GPR132Q9UNW8 380 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 KLF2Q9Y5W3 355 aaPredicted RBP10.05□□□□□ -0.8
RFFL-205ENST00000415395 POMT1Q9Y6A1 747 aa10.05□□□□□ -0.8
RFFL-205ENST00000415395 URB1O60287 2271 aaKnown RBP10.05□□□□□ -0.8
RFFL-205ENST00000415395 FIGNL2A6NMB9 653 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 SYNGR3O43761 229 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 PMP2P02689 132 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 HCKP08631 526 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 AMY2BP19961 511 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 HOXA1P49639 335 aaPredicted RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 ZNF121P58317 390 aaPredicted RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 PJVKQ0ZLH3 352 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 SMCO1Q147U7 214 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 FBXW9Q5XUX1 488 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 DHRS7BQ6IAN0 325 aaPredicted RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 FAM180AQ6UWF9 173 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 GLIPR1L1Q6UWM5 242 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 SLC16A14Q7RTX9 510 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 NUFIP2Q7Z417 695 aaKnown RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 SKA3Q8IX90 412 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 ZNF283Q8N7M2 679 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 ADAD2Q8NCV1 583 aaKnown RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 ADAT3Q96EY9 351 aaPredicted RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 C2orf50Q96LR7 162 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 TREM1Q9NP99 234 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.04□□□□□ -0.8
RFFL-205ENST00000415395 BIN3Q9NQY0 253 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 TP53TG5Q9Y2B4 290 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 LOC400499M0QZD8 3231 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 ASPMQ8IZT6 3477 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 FREM1Q5H8C1 2179 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 CEP295Q9C0D2 2601 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 A0A0U1RQV5 110 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 OR6C6A6NF89 314 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 K7EM74 188 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 CDC14BO60729 498 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 CA11O75493 328 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 MPIG6BO95866 241 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 ZNF32P17041 273 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 CCL1P22362 96 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 CRYGSP22914 178 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 ID4P47928 161 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 ARF1P84077 181 aaKnown RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 ARFRP1Q13795 201 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 HMGN3Q15651 99 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 EIF2S3LQ2VIR3 472 aaKnown RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 KRTAP27-1Q3LI81 207 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 ACSF3Q4G176 576 aaPredicted RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 ZNF585AQ6P3V2 769 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 PLXDC2Q6UX71 529 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 FAM214BQ7L5A3 538 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 OR1F12Q8NHA8 337 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 MRGPRFQ96AM1 343 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 CMBLQ96DG6 245 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 TRIB1Q96RU8 372 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 GPER1Q99527 375 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 NKX3-1Q99801 234 aaPredicted RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 LPAR5Q9H1C0 372 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 METTL8Q9H825 291 aaKnown RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 LPAR3Q9UBY5 353 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 C14orf166Q9Y224 244 aaKnown RBP10.04□□□□□ -0.8
RFFL-205ENST00000415395 CELSR3Q9NYQ7 3312 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 DOCK7Q96N67 2140 aa10.04□□□□□ -0.8
RFFL-205ENST00000415395 ZNF705EA8MWA4 302 aaPredicted RBP10.03□□□□□ -0.8
RFFL-205ENST00000415395 M0R135 149 aa10.03□□□□□ -0.8
RFFL-205ENST00000415395 SSX5O60225 188 aa10.03□□□□□ -0.8
RFFL-205ENST00000415395 LMX1BO60663 402 aa10.03□□□□□ -0.8
RFFL-205ENST00000415395 WDR1O75083 606 aa10.03□□□□□ -0.8
RFFL-205ENST00000415395 IGLV3-1P01715 115 aa10.03□□□□□ -0.8
RFFL-205ENST00000415395 MMP7P09237 267 aaPredicted RBP10.03□□□□□ -0.8
RFFL-205ENST00000415395 COX5BP10606 129 aa10.03□□□□□ -0.8
RFFL-205ENST00000415395 TSC22D1Q15714 1073 aa10.03□□□□□ -0.8
RFFL-205ENST00000415395 MICBQ29980 383 aa10.03□□□□□ -0.8
RFFL-205ENST00000415395 ZNF324BQ6AW86 544 aaPredicted RBP10.03□□□□□ -0.8
RFFL-205ENST00000415395 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.03□□□□□ -0.8
RFFL-205ENST00000415395 PUSL1Q8N0Z8 303 aaKnown RBP10.03□□□□□ -0.8
RFFL-205ENST00000415395 OR8B12Q8NGG6 310 aa10.03□□□□□ -0.8
RFFL-205ENST00000415395 EXTL1Q92935 676 aa10.03□□□□□ -0.8
RFFL-205ENST00000415395 EMG1Q92979 244 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms