RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 LSM7Q9UK45 103 aaKnown RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 LAMTOR2Q9Y2Q5 125 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 PPP2R2CQ9Y2T4 447 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.08□□□□□ -1.92
SF3B1-203ENST00000414174 HS3ST3B1Q9Y662 390 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 PLCH2O75038 1416 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 GRIN2AQ12879 1464 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 BCL9LQ86UU0 1499 aa3.08□□□□□ -1.92
SF3B1-203ENST00000414174 TRAV36DV7A0A075B6V5 113 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 IGHV2OR16-5A0A0B4J2B6 119 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 A0A0G2JLM5 398 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 A0A1B0GTH9 108 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 TMEM202A6NGA9 273 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 C15orf61A6NNL5 157 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 B5MCH6 92 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 G3V2L1 256 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 H3BMQ9 156 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 J3KT08 172 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF593O00488 134 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 RNASET2O00584 256 aaKnown RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 PHOX2AO14813 284 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ICOSLGO75144 302 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 CLDN11O75508 207 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 KBTBD11O94819 623 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 GCGP01275 180 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 PFN1P07737 140 aaKnown RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 SP1P08047 785 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 OR4Q2P0C623 313 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZSCAN5DPP0CG00 497 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 CT45A6P0DMU7 189 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 CT45A5P0DMU8 189 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 CT45A7P0DMV0 189 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ORM2P19652 201 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 MYL9P24844 172 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 RPA3P35244 121 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 RPL4P36578 427 aaKnown RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 VAMP7P51809 220 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 DEFA1P59665 94 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 DEFA3P59666 94 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 TNFAIP6P98066 277 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 PIGFQ07326 219 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 PNRC1Q12796 327 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 MYBPHQ13203 477 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 UNC119Q13432 240 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 GPR50Q13585 617 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 HERPUD1Q15011 391 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 SSX1Q16384 188 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 LY6KQ17RY6 165 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF284Q2VY69 593 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF404Q494X3 552 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 CD300EQ496F6 205 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 CT45A1Q5HYN5 189 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 DCST2Q5T1A1 773 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 FAAP20Q6NZ36 180 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 SHC4Q6S5L8 630 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF66Q6ZN08 573 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 Q6ZSR6 202 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 FAM231DQ6ZW35 169 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 RBM23Q86U06 439 aaKnown RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 C1orf158Q8N1D5 194 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 SVBPQ8N300 66 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF664Q8N3J9 261 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 SPICQ8N5J4 248 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 FAM24BQ8N5W8 94 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF740Q8NDX6 193 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 DUSP18Q8NEJ0 188 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 OR4K1Q8NGD4 311 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 OR1S2Q8NGQ3 325 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 OR13A1Q8NGR1 328 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 CT45A3Q8NHU0 189 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 HMGCLL1Q8TB92 370 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF675Q8TD23 568 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 RXFP4Q8TDU9 374 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 RND1Q92730 232 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 CLDN23Q96B33 292 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 DDIT4LQ96D03 193 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 GALNT14Q96FL9 552 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 Q96MF0 132 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 ZNF681Q96N22 645 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 PSMB7Q99436 277 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 MRPL57Q9BQC6 102 aaKnown RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 AGMATQ9BSE5 352 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 SLC25A39Q9BZJ4 359 aaPredicted RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 C20orf27Q9GZN8 174 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 LPAR5Q9H1C0 372 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 SH3BGRL3Q9H299 93 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 PRO1933Q9H354 126 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 SRMSQ9H3Y6 488 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 CWH43Q9H720 699 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 VSIRQ9H7M9 311 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 TUBA4BQ9H853 241 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 HEXA-AS1Q9H8Q6 139 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 POPDC3Q9HBV1 291 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 EXOSC4Q9NPD3 245 aaKnown RBP3.07□□□□□ -1.92
SF3B1-203ENST00000414174 UBQLN4Q9NRR5 601 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 CISHQ9NSE2 258 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 UQCC1Q9NVA1 299 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 HRASLS2Q9NWW9 162 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 RNF181Q9P0P0 153 aa3.07□□□□□ -1.92
SF3B1-203ENST00000414174 RPS6KB2Q9UBS0 482 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms