RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TIAF1O95411 115 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 SYNGR4O95473 234 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 AKAIN1P0CW23 69 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 ADCYAP1P18509 176 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 CDK2P24941 298 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 NTSP30990 170 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 DUSP3P51452 185 aaPredicted RBP8.22□□□□□ -1.09
SNHG3-201ENST00000413987 SSBP1Q04837 148 aaKnown RBP8.22□□□□□ -1.09
SNHG3-201ENST00000413987 CRMP1Q14194 572 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 HNF4GQ14541 408 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 CYB5R2Q6BCY4 276 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 C11orf87Q6NUJ2 197 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 PWWP2BQ6NUJ5 590 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 FAAP20Q6NZ36 180 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 PLXDC2Q6UX71 529 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 OR56A1Q8NGH5 318 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 OR1L3Q8NH93 324 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 TCTEX1D2Q8WW35 142 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 GCDHQ92947 438 aaPredicted RBP8.22□□□□□ -1.09
SNHG3-201ENST00000413987 ZNF426Q9BUY5 554 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 ADAMTS20P59510 1910 aa8.22□□□□□ -1.09
SNHG3-201ENST00000413987 CNOT1A5YKK6 2376 aaKnown RBP8.22□□□□□ -1.09
SNHG3-201ENST00000413987 GLSO94925 669 aaPredicted RBP8.21□□□□□ -1.09
SNHG3-201ENST00000413987 MRPL3P09001 348 aaKnown RBP8.21□□□□□ -1.09
SNHG3-201ENST00000413987 ZGLP1P0C6A0 271 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 PMCHP20382 165 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 GCSHP23434 173 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 SLC6A8P48029 635 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 RPS11P62280 158 aaKnown RBP eCLIP8.21□□□□□ -1.09
SNHG3-201ENST00000413987 LSM6P62312 80 aaKnown RBP8.21□□□□□ -1.09
SNHG3-201ENST00000413987 FUT5Q11128 374 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 VWA2Q5GFL6 755 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 C1orf189Q5VU69 101 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 HIST2H2BCQ6DN03 193 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 HIST2H2BDQ6DRA6 164 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 NAA40Q86UY6 237 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 WDSUB1Q8N9V3 476 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 BOLLQ8N9W6 283 aaKnown RBP8.21□□□□□ -1.09
SNHG3-201ENST00000413987 OR4C16Q8NGL9 310 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 OR2T27Q8NH04 317 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 TMEM255BQ8WV15 326 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 AMDHD1Q96NU7 426 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 OR14A2Q96R54 314 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 GLIPR2Q9H4G4 154 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 NOX4Q9NPH5 578 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 MMP26Q9NRE1 261 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 OR5V1Q9UGF6 321 aa8.21□□□□□ -1.09
SNHG3-201ENST00000413987 AKAP13Q12802 2813 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 FER1L5A0AVI2 2057 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 CEP250Q9BV73 2442 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 TMEM272A0A1B0GTI8 110 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 GGT3PA6NGU5 568 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 COLCA2A8K830 154 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 EFCAB7A8K855 629 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 CDC42EP2O14613 210 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 XRCC3O43542 346 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 FOXS1O43638 330 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 CD79AP11912 226 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 CD59P13987 128 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 SLC2A5P22732 501 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 EDNRAP25101 427 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 RBM34P42696 430 aaKnown RBP8.21□□□□□ -1.1
SNHG3-201ENST00000413987 OR1D4P47884 311 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 CDX1P47902 265 aaPredicted RBP8.21□□□□□ -1.1
SNHG3-201ENST00000413987 PDX1P52945 283 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 TMEM33P57088 247 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 BSXQ3C1V8 233 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 ACSM6Q6P461 480 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 WDR74Q6RFH5 385 aaPredicted RBP8.21□□□□□ -1.1
SNHG3-201ENST00000413987 TTLL10Q6ZVT0 673 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 SDR9C7Q8NEX9 313 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 STOML3Q8TAV4 291 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 ERGIC1Q969X5 290 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 CNRIP1Q96F85 164 aaPredicted RBP8.21□□□□□ -1.1
SNHG3-201ENST00000413987 PELI1Q96FA3 418 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 SLC25A21Q9BQT8 299 aaPredicted RBP8.21□□□□□ -1.1
SNHG3-201ENST00000413987 TLNRD1Q9H1K6 362 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 TMEM100Q9NV29 134 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 FRRS1LQ9P0K9 344 aa8.21□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF346Q9UL40 294 aaKnown RBP8.21□□□□□ -1.1
SNHG3-201ENST00000413987 TMEM200CA6NKL6 621 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 H3BMH7 237 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 IFNGP01579 166 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 NCBP2P52298 156 aaKnown RBP eCLIP8.2□□□□□ -1.14e-33■■■■■ 42.7
SNHG3-201ENST00000413987 ZNF134P52741 427 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 MRPS34P82930 218 aaKnown RBP8.2□□□□□ -1.1
SNHG3-201ENST00000413987 RTP5Q14D33 572 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 PRTGQ2VWP7 1150 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF433Q8N7K0 673 aaPredicted RBP8.2□□□□□ -1.1
SNHG3-201ENST00000413987 SLC38A9Q8NBW4 561 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 INO80EQ8NBZ0 244 aaPredicted RBP8.2□□□□□ -1.1
SNHG3-201ENST00000413987 MRAPQ8TCY5 172 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 PEX11GQ96HA9 241 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 LOXL4Q96JB6 756 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF75AQ96N20 296 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 OR6C1Q96RD1 312 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF2Q9BSG1 426 aaPredicted RBP8.2□□□□□ -1.1
SNHG3-201ENST00000413987 ADAT1Q9BUB4 502 aaKnown RBP8.2□□□□□ -1.1
SNHG3-201ENST00000413987 HCAR1Q9BXC0 346 aa8.2□□□□□ -1.1
SNHG3-201ENST00000413987 OR10A5Q9H207 317 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms