RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 PTTG1O95997 202 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 PLAUP00749 431 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 IGHV1-46P01743 117 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 LPLP06858 475 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 GRPP07492 148 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 ADH4P08319 380 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 MELTFP08582 738 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 GSTP1P09211 210 aaKnown RBP5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A15PP0C7V4 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A13PP0C7W8 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A14PP0C7W9 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 FAM90A24PP0C7X0 464 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 RNF224P0DH78 156 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 PGA5P0DJD9 388 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 GNB3P16520 340 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 PRKACAP17612 351 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 CHATP28329 748 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 BLVRBP30043 206 aaPredicted RBP5.63□□□□□ -1.51
VPS41-204ENST00000413141 PRSS3P35030 304 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 SERPINF1P36955 418 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 KIR2DL3P43628 341 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 INPP1P49441 399 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 TMEM50BP56557 158 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 ERVK11-1P61568 191 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 KLF9Q13886 244 aaPredicted RBP5.63□□□□□ -1.51
VPS41-204ENST00000413141 OXA1LQ15070 435 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 EFNB3Q15768 340 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 MPPED2Q15777 294 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 TAF9Q16594 264 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 ZNF672Q499Z4 452 aaPredicted RBP5.63□□□□□ -1.51
VPS41-204ENST00000413141 CDNFQ49AH0 187 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 OLFML2AQ68BL7 652 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 ZNF57Q68EA5 555 aaPredicted RBP5.63□□□□□ -1.51
VPS41-204ENST00000413141 SIGIRRQ6IA17 410 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 WDR82Q6UXN9 313 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 LINC00596Q86U02 117 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 C11orf53Q8IXP5 236 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 Q8IYB0 196 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 TOMM5Q8N4H5 51 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 CELF2-AS1Q8N7Q2 184 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 POC5Q8NA72 575 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 POC1AQ8NBT0 407 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 CHST4Q8NCG5 386 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 C19orf18Q8NEA5 215 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 LILRB1Q8NHL6 650 aaPredicted RBP5.63□□□□□ -1.51
VPS41-204ENST00000413141 GPX8Q8TED1 209 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 CHPT1Q8WUD6 406 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 NUDCD2Q8WVJ2 157 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 ST8SIA4Q92187 359 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 EMG1Q92979 244 aaKnown RBP5.63□□□□□ -1.51
VPS41-204ENST00000413141 SEH1LQ96EE3 360 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 POM121Q96HA1 1249 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 CYYR1Q96J86 154 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 MEGF10Q96KG7 1140 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 OR2V2Q96R30 315 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 PECRQ9BY49 303 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 C11orf54Q9H0W9 315 aaPredicted RBP5.63□□□□□ -1.51
VPS41-204ENST00000413141 HES4Q9HCC6 221 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 ZNF581Q9P0T4 197 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 KLK11Q9UBX7 282 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 ZDHHC8Q9ULC8 765 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 HSF4Q9ULV5 492 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 KCNK7Q9Y2U2 307 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 ADGRG4Q8IZF6 3080 aa5.63□□□□□ -1.51
VPS41-204ENST00000413141 UBR5O95071 2799 aaPredicted RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 CADP27708 2225 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 LINC00854A0A1B0GVQ3 168 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 ANKRD20A5PA0PJZ0 165 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 MEIS3P1A6NDR6 274 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 C17orf100A8MU93 164 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 SERPINE3A8MV23 424 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 VSTM5A8MXK1 200 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 H7C417 338 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 PYCARD-AS1I3L0S3 204 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 LYRM1O43325 122 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 SSX4O60224 188 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 SSX5O60225 188 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 NOS1APO75052 506 aaPredicted RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 PDCD6O75340 191 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 CA11O75493 328 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 OR7C1O76099 320 aaPredicted RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 NXPH2O95156 264 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 ECDO95905 644 aaPredicted RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 CD55P08174 381 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 ACAA1P09110 424 aaPredicted RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 CSF1P09603 554 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 TNFSF4P23510 183 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 APOBEC3AP31941 199 aaPredicted RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 BTCP35070 178 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 GATA4P43694 442 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 RFX2P48378 723 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 SRP9P49458 86 aaKnown RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 SNU13P55769 128 aaKnown RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 GNG2P59768 71 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 AP3S2P59780 193 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 ACTBP60709 375 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 ACTG1P63261 375 aa5.62□□□□□ -1.51
VPS41-204ENST00000413141 TNFAIP6P98066 277 aaPredicted RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 SSBP1Q04837 148 aaKnown RBP5.62□□□□□ -1.51
VPS41-204ENST00000413141 IL13RA2Q14627 380 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms