RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 SHROOM3Q8TF72 1996 aa6.62□□□□□ -1.35
PTPN3-203ENST00000412145 TRAV17A0A0B4J275 112 aa6.62□□□□□ -1.35
PTPN3-203ENST00000412145 ZC3H12DA2A288 527 aaKnown RBP6.62□□□□□ -1.35
PTPN3-203ENST00000412145 ZNF253O75346 499 aa6.62□□□□□ -1.35
PTPN3-203ENST00000412145 MPC2O95563 127 aa6.62□□□□□ -1.35
PTPN3-203ENST00000412145 CDX1P47902 265 aaPredicted RBP6.62□□□□□ -1.35
PTPN3-203ENST00000412145 TCL1AP56279 114 aa6.62□□□□□ -1.35
PTPN3-203ENST00000412145 PLP1P60201 277 aa6.62□□□□□ -1.35
PTPN3-203ENST00000412145 MRPL43Q8N983 215 aaKnown RBP6.62□□□□□ -1.35
PTPN3-203ENST00000412145 TMEM37Q8WXS4 190 aa6.62□□□□□ -1.35
PTPN3-203ENST00000412145 RAB1CQ92928 201 aa6.62□□□□□ -1.35
PTPN3-203ENST00000412145 DOK5Q9P104 306 aa6.62□□□□□ -1.35
PTPN3-203ENST00000412145 SCN4AP35499 1836 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 A0A1W2PS18 150 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 IFITM10A6NMD0 228 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 DHRS7CA6NNS2 312 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 PLPP2O43688 288 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 KLK8O60259 260 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 NPPBP16860 134 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 UBALD2Q8IYN6 164 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 CA13Q8N1Q1 262 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 C10orf126Q8N4M7 172 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 OR4D9Q8NGE8 314 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 RDH5Q92781 318 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 GNRHR2Q96P88 292 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 RBM14Q96PK6 669 aaKnown RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 ICAM5Q9UMF0 924 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 OR2W1Q9Y3N9 320 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 GAGE10A6NGK3 116 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 PPIAP62937 165 aaKnown RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 NAAAQ02083 359 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 DLEU7Q6UYE1 221 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 PFN4Q8NHR9 129 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 LINC00615Q96LM1 132 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 SGK494Q96LW2 274 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 HHIPQ96QV1 700 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 ALKBH7Q9BT30 221 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 RAB33BQ9H082 229 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 MBNL1Q9NR56 388 aaKnown RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 UFC1Q9Y3C8 167 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 CTXND1A0A1B0GTU2 59 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 CYR61O00622 381 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 S1PR2O95136 353 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 COL8A1P27658 744 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 CD82P27701 267 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 SLC25A30Q5SVS4 291 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 FNDC7Q5VTL7 733 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 TBC1D26Q86UD7 250 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 H1FOOQ8IZA3 346 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 OR10V1Q8NGI7 309 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 Q8WTZ3 238 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 PTX4Q96A99 478 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 MARVELD1Q9BSK0 173 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 GHITMQ9H3K2 345 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 TRAV38-1A0A0B4J264 116 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 OR2W5A6NFC9 320 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 A8MWL6 223 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 GUSBP08236 651 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 CSNK1EP49674 416 aaKnown RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 ZNF121P58317 390 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 OR5M10Q6IEU7 315 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 SLC35E3Q7Z769 313 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 RASL11BQ9BPW5 248 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 HINT3Q9NQE9 182 aaKnown RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 GFYI3L273 518 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 SDCBPO00560 298 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 PLPP1O14494 284 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 SEC11BP0C7V7 166 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 HMGA2P52926 109 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 TCF23Q7RTU1 214 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 MOB3BQ86TA1 216 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 WDFY1Q8IWB7 410 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 ZC3HAV1LQ96H79 300 aaKnown RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 UBTD1Q9HAC8 227 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 CLEC2DQ9UHP7 191 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 PSG11Q9UQ72 335 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 SIT1Q9Y3P8 196 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 PRSS21Q9Y6M0 314 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 TMEM210A6NLX4 147 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 DHRS2Q13268 280 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 TMEM108Q6UXF1 575 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 SLC16A11Q8NCK7 471 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 ELSPBP1Q96BH3 223 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 INPP5JQ15735 1006 aaPredicted RBP6.61□□□□□ -1.35
PTPN3-203ENST00000412145 C9orf135Q5VTT2 229 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 ABHD1Q96SE0 405 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 PIK3C2AO00443 1686 aa6.61□□□□□ -1.35
PTPN3-203ENST00000412145 H3BVH4 76 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 PRKRAO75569 313 aaKnown RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 CA2P00918 260 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 PLPPR5Q32ZL2 321 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 C1orf220Q5T0J3 134 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 CGB2Q6NT52 195 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 Q6ZSR9 355 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 ZMAT3Q9HA38 289 aaKnown RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 B9D1Q9UPM9 204 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 SERTM1A2A2V5 107 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 M0R1B8 84 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 RBFOX2O43251 390 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 NMUP48645 174 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms