RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 DUS4LO95620 317 aaKnown RBP13.4□□□□□ -0.26
MRPL55-220ENST00000411464 CLIC3O95833 236 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 ACTR3P61158 418 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 ERVK11-1P61568 191 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 MS4A2Q01362 244 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 IL24Q13007 206 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 IL18R1Q13478 541 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 EDDM3AQ14507 147 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 SNAPC1Q16533 368 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 BCL2L15Q5TBC7 163 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 TMEM236Q5W0B7 351 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 ZBTB49Q6ZSB9 765 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 ZNF676Q8N7Q3 588 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 TTTY10Q9BZA0 68 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 PKIBQ9C010 78 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 TVP23BQ9NYZ1 205 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 SESN1Q9Y6P5 492 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 V9GYS6 101 aa13.4□□□□□ -0.26
MRPL55-220ENST00000411464 IGHV2-26A0A0B4J1V2 119 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 FAM230AA0A1W2PPH8 454 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 PRR32B1ATL7 298 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 E2F6O75461 281 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 C11orf87Q6NUJ2 197 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 TMEM179BQ7Z7N9 219 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 ELMOD2Q8IZ81 293 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 OR8H2Q8N162 312 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 STMN2Q93045 179 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 MOB1AQ9H8S9 216 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 DNAJB9Q9UBS3 223 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 OR52A1Q9UKL2 312 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 COPS3Q9UNS2 423 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 SLC7A11Q9UPY5 501 aa13.39□□□□□ -0.27
MRPL55-220ENST00000411464 DHRS7CA6NNS2 312 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 VSIG8P0DPA2 414 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 ANXA8P13928 327 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 PRKACGP22612 351 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 HTR1DP28221 377 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 TCTEX1D4Q5JR98 221 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 C16orf82Q7Z2V1 217 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 OR4X2Q8NGF9 303 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 OR14K1Q8NGZ2 314 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 TRMT10AQ8TBZ6 339 aaKnown RBP13.38□□□□□ -0.27
MRPL55-220ENST00000411464 MYDGFQ969H8 173 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 SNX22Q96L94 193 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 CEP19Q96LK0 163 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 CNN2Q99439 309 aaKnown RBP13.38□□□□□ -0.27
MRPL55-220ENST00000411464 APOL4Q9BPW4 351 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 CLEC7AQ9BXN2 247 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 TMEM133Q9H2Q1 129 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 LINC00312Q9Y6C7 94 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 R4GMQ9 66 aa13.38□□□□□ -0.27
MRPL55-220ENST00000411464 KMT2CQ8NEZ4 4911 aaKnown RBP13.37□□□□□ -0.27
MRPL55-220ENST00000411464 A0A1B0GTI1 187 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 WI2-2373I1.2A0A1W2PRP0 233 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 CCDC182A6NF36 153 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 F8VVB4 439 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 F8VWA3 439 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 SRSF10O75494 262 aaKnown RBP13.37□□□□□ -0.27
MRPL55-220ENST00000411464 INMTO95050 263 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 BRS3P32247 399 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 KRTAP10-11P60412 298 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 CXCR4P61073 352 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 CD69Q07108 199 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 KHDC1LQ5JSQ8 128 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 SLX4IPQ5VYV7 408 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 ZNF322Q6U7Q0 402 aaPredicted RBP13.37□□□□□ -0.27
MRPL55-220ENST00000411464 EGFL6Q8IUX8 553 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 NSL1Q96IY1 281 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 LIN7BQ9HAP6 207 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 PLEKHA1Q9HB21 404 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 SLC25A19Q9HC21 320 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 MTCH1Q9NZJ7 389 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 SNX5Q9Y5X3 404 aa13.37□□□□□ -0.27
MRPL55-220ENST00000411464 TMEM82A0PJX8 343 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 LPLP06858 475 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 GABRR1P24046 479 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 PEX2P28328 305 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 ARHGDIBP52566 201 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 GRK1Q15835 563 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 ABCA11PQ4W5N1 156 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 TCF23Q7RTU1 214 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 ADGRG5Q8IZF4 528 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 HS3ST5Q8IZT8 346 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 TPRX1Q8N7U7 411 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 DPF1Q92782 380 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 SLAMF9Q96A28 289 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 CCDC124Q96CT7 223 aaKnown RBP13.36□□□□□ -0.27
MRPL55-220ENST00000411464 ASB9Q96DX5 294 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 CADM1Q9BY67 442 aaKnown RBP13.36□□□□□ -0.27
MRPL55-220ENST00000411464 INPP5EQ9NRR6 644 aa13.36□□□□□ -0.27
MRPL55-220ENST00000411464 E9PQ18 207 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 MAGEB4O15481 346 aaPredicted RBP13.35□□□□□ -0.27
MRPL55-220ENST00000411464 CD24P25063 80 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 FUT6P51993 359 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 PLEKHG7Q6ZR37 379 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 Q6ZSR3 168 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 SLC25A26Q70HW3 274 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 TRAPPC6BQ86SZ2 158 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 SLC35F2Q8IXU6 374 aa13.35□□□□□ -0.27
MRPL55-220ENST00000411464 ENTHD1Q8IYW4 607 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms