RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 DUX4L6P0CJ89 424 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 DUX4L7P0CJ90 424 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 GABRR1P24046 479 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 ARPC4P59998 168 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 EXOSC2Q13868 293 aaKnown RBP11.73□□□□□ -0.53
LIMS1-205ENST00000410093 C2orf68Q2NKX9 166 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 ESCO2Q56NI9 601 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 GSG1LQ6UXU4 331 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 NUFIP2Q7Z417 695 aaKnown RBP11.73□□□□□ -0.53
LIMS1-205ENST00000410093 SLC51BQ86UW2 128 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 MKXQ8IYA7 352 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 ZDHHC23Q8IYP9 409 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 OR8H3Q8N146 312 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 OR10K1Q8NGX5 313 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 OR51F2Q8NH61 342 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 CMSS1Q9BQ75 279 aaKnown RBP11.73□□□□□ -0.53
LIMS1-205ENST00000410093 NECAP2Q9NVZ3 263 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 EHFQ9NZC4 300 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 DUX4Q9UBX2 424 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 ANXA10Q9UJ72 324 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 PTPRQQ9UMZ3 2332 aa11.73□□□□□ -0.53
LIMS1-205ENST00000410093 NBEAQ8NFP9 2946 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 FXYD6-FXYD2A0A087WZ82 144 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 C5orf49A4QMS7 147 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 OR5B21A6NL26 309 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 ZNF891A8MT65 544 aaPredicted RBP11.72□□□□□ -0.53
LIMS1-205ENST00000410093 AQP7O14520 342 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 ARPC5O15511 151 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 SIX6O95475 246 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 IGHV3-9P01782 118 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 CD79AP11912 226 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 AKR1C4P17516 323 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 FUT3P21217 361 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 TUBG1P23258 451 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 VAMP1P23763 118 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 SSTR2P30874 369 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 DCAF12L2Q5VW00 463 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 C11orf87Q6NUJ2 197 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 DHRS11Q6UWP2 260 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 Q6ZS49 121 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 P4HA3Q7Z4N8 544 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 ZNF546Q86UE3 836 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 THAP6Q8TBB0 222 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 BCL2L2Q92843 193 aaPredicted RBP11.72□□□□□ -0.53
LIMS1-205ENST00000410093 MFFQ9GZY8 342 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 FXYD6Q9H0Q3 95 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 DEFB127Q9H1M4 99 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 C5orf66Q9H5L9 145 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 TUBG2Q9NRH3 451 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 MED9Q9NWA0 146 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 SSUH2Q9Y2M2 353 aa11.72□□□□□ -0.53
LIMS1-205ENST00000410093 HLA-HP01893 362 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 GLAP06280 429 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 CTSDP07339 412 aaPredicted RBP11.71□□□□□ -0.53
LIMS1-205ENST00000410093 RBM11P57052 281 aaKnown RBP11.71□□□□□ -0.53
LIMS1-205ENST00000410093 SORDQ00796 357 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 HLXQ14774 488 aaPredicted RBP11.71□□□□□ -0.53
LIMS1-205ENST00000410093 MPV17LQ2QL34 196 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 AADACL3Q5VUY0 350 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 OR2A2Q6IF42 318 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 C6orf201Q7Z4U5 140 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 VASH2Q86V25 355 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 ZNF611Q8N823 705 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 OR13G1Q8NGZ3 307 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 GTF3AQ92664 365 aaKnown RBP11.71□□□□□ -0.53
LIMS1-205ENST00000410093 SARAFQ96BY9 339 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 WBP1Q96G27 269 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 BBC3Q96PG8 261 aaPredicted RBP11.71□□□□□ -0.53
LIMS1-205ENST00000410093 ARL6Q9H0F7 186 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 ZNF286AQ9HBT8 521 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 SPACA1Q9HBV2 294 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 ZNF701Q9NV72 531 aaPredicted RBP11.71□□□□□ -0.53
LIMS1-205ENST00000410093 SPRR3Q9UBC9 169 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 ST3GAL6Q9Y274 331 aa11.71□□□□□ -0.53
LIMS1-205ENST00000410093 A0A096LPE4 126 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 A0A1W2PPZ6 126 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 ANKRD30BLA7E2S9 258 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 ZNF850A8MQ14 1090 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 SPRY1O43609 319 aaPredicted RBP11.7□□□□□ -0.54
LIMS1-205ENST00000410093 CEACAM4O75871 244 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 PET100P0DJ07 73 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 UBA52P62987 128 aaKnown RBP11.7□□□□□ -0.54
LIMS1-205ENST00000410093 PRDX4Q13162 271 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 TAF9Q16594 264 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 TBC1D28Q2M2D7 210 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 NKAPLQ5M9Q1 402 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 UNQ6126/PRO20091Q6UXV3 157 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 ACOT7LQ6ZUV0 252 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 KCNRGQ8N5I3 272 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 ADAD2Q8NCV1 583 aaKnown RBP11.7□□□□□ -0.54
LIMS1-205ENST00000410093 C1orf162Q8NEQ5 155 aaPredicted RBP11.7□□□□□ -0.54
LIMS1-205ENST00000410093 OR56B2PQ8NGI1 322 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 ANGPTL6Q8NI99 470 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 SCARB1Q8WTV0 552 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 PAPOLGQ9BWT3 736 aaKnown RBP11.7□□□□□ -0.54
LIMS1-205ENST00000410093 RIMS4Q9H426 269 aaPredicted RBP11.7□□□□□ -0.54
LIMS1-205ENST00000410093 FN3KRPQ9HA64 309 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 C12orf4Q9NQ89 552 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 CLCF1Q9UBD9 225 aa11.7□□□□□ -0.54
LIMS1-205ENST00000410093 MEMO1Q9Y316 297 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms