RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 WIPI1Q5MNZ9 446 aaPredicted RBP13.76□□□□□ -0.21
HOXD3-202ENST00000410016 TMEM268Q5VZI3 342 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 SKA3Q8IX90 412 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 OR2V1Q8NHB1 315 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 TCFL5Q9UL49 500 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 NCKAP5O14513 1909 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 ZNF850A8MQ14 1090 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 IGHEP01854 428 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 RPL12P30050 165 aaKnown RBP13.76□□□□□ -0.21
HOXD3-202ENST00000410016 PDZK1IP1Q13113 114 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 DAZAP2Q15038 168 aaPredicted RBP13.76□□□□□ -0.21
HOXD3-202ENST00000410016 FBXL14Q8N1E6 418 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 GALNT14Q96FL9 552 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 ADAT1Q9BUB4 502 aaKnown RBP13.76□□□□□ -0.21
HOXD3-202ENST00000410016 RGCCQ9H4X1 137 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 UQCC1Q9NVA1 299 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 AMDHD2Q9Y303 409 aa13.76□□□□□ -0.21
HOXD3-202ENST00000410016 ICAM2P13598 275 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 OTX2P32243 289 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 TMEM187Q14656 261 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 OR8B8Q15620 311 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 ACER2Q5QJU3 275 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 Q6ZPA2 131 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.75□□□□□ -0.21
HOXD3-202ENST00000410016 OSR2Q8N2R0 312 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 OR5T2Q8NGG2 359 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 PRRX2Q99811 253 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 HRH4Q9H3N8 390 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 GPR35Q9HC97 309 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 PCDHB16Q9NRJ7 776 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 IL36GQ9NZH8 169 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 PINLYPA6NC86 204 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 B4E171 279 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 ZNF587BE7ETH6 402 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 F8W036 122 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 K7EPK0 472 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 CER1O95813 267 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 CST4P01036 141 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 MMP7P09237 267 aaPredicted RBP13.75□□□□□ -0.21
HOXD3-202ENST00000410016 TSPAN7P41732 249 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 LPAR6P43657 344 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 EIF5AP63241 154 aaKnown RBP13.75□□□□□ -0.21
HOXD3-202ENST00000410016 BLOC1S1P78537 153 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 SP6Q3SY56 376 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 TRIM61Q5EBN2 209 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 FAM71E2Q8N5Q1 922 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 ABHD3Q8WU67 409 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 TMEM231Q9H6L2 316 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 RYDENQ9NUL5 291 aaKnown RBP13.75□□□□□ -0.21
HOXD3-202ENST00000410016 ST3GAL6Q9Y274 331 aa13.75□□□□□ -0.21
HOXD3-202ENST00000410016 MRPS18CQ9Y3D5 142 aaKnown RBP13.75□□□□□ -0.21
HOXD3-202ENST00000410016 FAM221AA4D161 298 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 TRAPPC6AO75865 159 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 IFNA21P01568 189 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 ZNF728P0DKX0 622 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 CAV2P51636 162 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 FUT6P51993 359 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 GFRA1P56159 465 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 TMEM33P57088 247 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 SHEQ5VZ18 495 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 TMEM88Q6PEY1 159 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 RTN4IP1Q8WWV3 396 aaPredicted RBP13.74□□□□□ -0.21
HOXD3-202ENST00000410016 TOMM40LQ969M1 308 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 ZNF845Q96IR2 970 aaPredicted RBP13.74□□□□□ -0.21
HOXD3-202ENST00000410016 SEC11CQ9BY50 192 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 NAA60Q9H7X0 242 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 BCO1Q9HAY6 547 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 RHOFQ9HBH0 211 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 CYTIPO60759 359 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 GAPDHP04406 335 aaKnown RBP13.74□□□□□ -0.21
HOXD3-202ENST00000410016 OR5AC1P0C628 307 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 EDN3P14138 238 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 FCGR2CP31995 323 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 SULT1A2P50226 295 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 PCBD1P61457 104 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 FOXO1Q12778 655 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 EIF5AL1Q6IS14 154 aaKnown RBP13.74□□□□□ -0.21
HOXD3-202ENST00000410016 TIPARPQ7Z3E1 657 aaKnown RBP13.74□□□□□ -0.21
HOXD3-202ENST00000410016 NAXEQ8NCW5 288 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 CPEB3Q8NE35 698 aaKnown RBP13.74□□□□□ -0.21
HOXD3-202ENST00000410016 PSMF1Q92530 271 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 SPSB4Q96A44 273 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 CDX2Q99626 313 aaPredicted RBP13.74□□□□□ -0.21
HOXD3-202ENST00000410016 FBXL17Q9UF56 701 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 KCNIP3Q9Y2W7 256 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 SHANK1Q9Y566 2161 aa13.74□□□□□ -0.21
HOXD3-202ENST00000410016 F12P00748 615 aaPredicted RBP13.73□□□□□ -0.21
HOXD3-202ENST00000410016 MUC1P15941 1255 aaPredicted RBP13.73□□□□□ -0.21
HOXD3-202ENST00000410016 TCN2P20062 427 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 CALHM1Q8IU99 346 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 LRTM2Q8N967 370 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 TREM1Q9NP99 234 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 FAM96BQ9Y3D0 163 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 JTBO76095 146 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 MBPP02686 304 aaPredicted RBP13.73□□□□□ -0.21
HOXD3-202ENST00000410016 PDCD1Q15116 288 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 DCAF12Q5T6F0 453 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 TSPO2Q5TGU0 170 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 BTNL8Q6UX41 500 aa13.73□□□□□ -0.21
HOXD3-202ENST00000410016 PIGCQ92535 297 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms