RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 CHRM2P08172 466 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DUX4L2P0CJ85 424 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DUX4L3P0CJ86 424 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DUX4L4P0CJ87 422 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DUX4L5P0CJ88 424 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DUX4L6P0CJ89 424 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DUX4L7P0CJ90 424 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 NDUFB7P17568 137 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 ADRA2CP18825 462 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 AMY2BP19961 511 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 EPHA1P21709 976 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 PRDX2P32119 198 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 BMXP51813 675 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 GABARAPL2P60520 117 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 IRF3Q14653 427 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 KISS1Q15726 138 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DGUOKQ16854 277 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 METTL11BQ5VVY1 283 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 ZNF529Q6P280 563 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DUX4L9Q6RFH8 374 aaPredicted RBP9.04□□□□□ -0.96
CHMP3-205ENST00000409810 SAXO1Q8IYX7 474 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 CMTM4Q8IZR5 234 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 FAM58AQ8N1B3 248 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 MS4A15Q8N5U1 240 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 OR13C5Q8NGS8 318 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 H1FXQ92522 213 aaKnown RBP9.04□□□□□ -0.96
CHMP3-205ENST00000409810 UFD1Q92890 307 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 RFT1Q96AA3 541 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DACT3Q96B18 629 aaPredicted RBP9.04□□□□□ -0.96
CHMP3-205ENST00000409810 SPACA5Q96QH8 159 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DCTN5Q9BTE1 182 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 FAM234AQ9H0X4 552 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 TMEM138Q9NPI0 162 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 PAK1IP1Q9NWT1 392 aaPredicted RBP9.04□□□□□ -0.96
CHMP3-205ENST00000409810 MTCH1Q9NZJ7 389 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 DUX4Q9UBX2 424 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 OPN4Q9UHM6 478 aa9.04□□□□□ -0.96
CHMP3-205ENST00000409810 RPUSD1Q9UJJ7 312 aaKnown RBP9.04□□□□□ -0.96
CHMP3-205ENST00000409810 TRBV23-1A0A0A0MS06 115 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 A0A1W2PPH5 198 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 SPRY1O43609 319 aaPredicted RBP9.03□□□□□ -0.96
CHMP3-205ENST00000409810 MRPS14O60783 128 aaKnown RBP9.03□□□□□ -0.96
CHMP3-205ENST00000409810 KDM4BO94953 1096 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 INMTO95050 263 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 TMEM225BP0DP42 221 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 SELLP14151 372 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 PRKACAP17612 351 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 FSTP19883 344 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 BCL3P20749 454 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 FPR2P25090 351 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 BDKRB2P30411 391 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 FGF12P61328 243 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 GPR50Q13585 617 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 TBCEQ15813 527 aaPredicted RBP9.03□□□□□ -0.96
CHMP3-205ENST00000409810 SPIN3Q5JUX0 258 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 DDI2Q5TDH0 399 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 C1orf229Q6ZS94 237 aaPredicted RBP9.03□□□□□ -0.96
CHMP3-205ENST00000409810 SATL1Q86VE3 508 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 PRIMA1Q86XR5 153 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 BATF2Q8N1L9 274 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 BPIFB2Q8N4F0 458 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 CD177Q8N6Q3 437 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 ZNRF1Q8ND25 227 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 PXT1Q8NFP0 134 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 OR5D18Q8NGL1 313 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 C8orf46Q8TAG6 207 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 UPRTQ96BW1 309 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 OR14A2Q96R54 314 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 OR5M11Q96RB7 305 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 S100A13Q99584 98 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 FAM192AQ9GZU8 254 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 CNTD2Q9H8S5 307 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 ISYNA1Q9NPH2 558 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 RBFOX1Q9NWB1 397 aaKnown RBP9.03□□□□□ -0.96
CHMP3-205ENST00000409810 NUP50Q9UKX7 468 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 FOXJ3Q9UPW0 622 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 LSM2Q9Y333 95 aaKnown RBP9.03□□□□□ -0.96
CHMP3-205ENST00000409810 MAB21L2Q9Y586 359 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 KPTNQ9Y664 436 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 CUBNO60494 3623 aa9.03□□□□□ -0.96
CHMP3-205ENST00000409810 TRAV40A0A0B4J280 105 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 A0A1W2PQ09 198 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 TCF21O43680 179 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 ANGPTL7O43827 346 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 GPX5O75715 221 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 TOX4O94842 621 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 HAND1O96004 215 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 HSMCR30P0CW71 290 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 ZNF93P35789 620 aaPredicted RBP9.02□□□□□ -0.97
CHMP3-205ENST00000409810 MTNR1BP49286 362 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 ZP1P60852 638 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 RPS11P62280 158 aaKnown RBP eCLIP9.02□□□□□ -0.97
CHMP3-205ENST00000409810 COL10A1Q03692 680 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 MLLT11Q13015 90 aaPredicted RBP9.02□□□□□ -0.97
CHMP3-205ENST00000409810 BLMHQ13867 455 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 TRAM1Q15629 374 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 GPR157Q5UAW9 335 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 ZNF367Q7RTV3 350 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 SVOPQ8N4V2 548 aa9.02□□□□□ -0.97
CHMP3-205ENST00000409810 KIR3DL3Q8N743 410 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms