RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 FAM76BQ5HYJ3 339 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 HACD4Q5VWC8 232 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 SIGIRRQ6IA17 410 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 DMRTC2Q8IXT2 367 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-204ENST00000409727 GVQW1Q8N7I0 195 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 MINDY2Q8NBR6 621 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 DYRK2Q92630 601 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 EMG1Q92979 244 aaKnown RBP10.57□□□□□ -0.72
CHMP3-204ENST00000409727 ELMOD3Q96FG2 381 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 NUDT16L1Q9BRJ7 211 aaKnown RBP10.57□□□□□ -0.72
CHMP3-204ENST00000409727 PKIBQ9C010 78 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 PLK3Q9H4B4 646 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 MCUBQ9NWR8 336 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 NLKQ9UBE8 527 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 IGLV3-9A0A075B6K5 115 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 FAM240BA0A1B0GVZ2 78 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 hCG_1807616A0A1W2PRN6 198 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 ANKRD20A5PA0PJZ0 165 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 TMEM210A6NLX4 147 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 CENPXA8MT69 81 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 FOXI3A8MTJ6 420 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-204ENST00000409727 SHISA9B4DS77 424 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 B8ZZF3 427 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 PYCARD-AS1I3L0S3 204 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 MFNGO00587 321 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 HSPB6O14558 160 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 CLDN14O95500 239 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 ECDO95905 644 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-204ENST00000409727 PLAUP00749 431 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 GSTT2BP0CG30 244 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 MPZP25189 248 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 HLA-DMAP28067 261 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 KIR2DL3P43628 341 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 AP3S2P59780 193 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 FGF12P61328 243 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 SORDQ00796 357 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 SPRNQ5BIV9 151 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 ATAD3CQ5T2N8 411 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 DNM1P46Q6ZS02 220 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 TMEM200AQ86VY9 491 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 CELF2-AS1Q8N7Q2 184 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 MRPS24Q96EL2 167 aaKnown RBP10.57□□□□□ -0.72
CHMP3-204ENST00000409727 FAAP24Q9BTP7 215 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 SCPEP1Q9HB40 452 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 HRASLSQ9HDD0 168 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 IFT46Q9NQC8 304 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 NPDC1Q9NQX5 325 aaPredicted RBP10.57□□□□□ -0.72
CHMP3-204ENST00000409727 POLDIP2Q9Y2S7 368 aa10.57□□□□□ -0.72
CHMP3-204ENST00000409727 HIVEP3Q5T1R4 2406 aa10.56□□□□□ -0.72
CHMP3-204ENST00000409727 SSX5O60225 188 aa10.56□□□□□ -0.72
CHMP3-204ENST00000409727 GSTP1P09211 210 aaKnown RBP10.56□□□□□ -0.72
CHMP3-204ENST00000409727 CSF1P09603 554 aa10.56□□□□□ -0.72
CHMP3-204ENST00000409727 ZNF81P51508 661 aa10.56□□□□□ -0.72
CHMP3-204ENST00000409727 CCR6P51684 374 aa10.56□□□□□ -0.72
CHMP3-204ENST00000409727 IKZF1Q13422 519 aa10.56□□□□□ -0.72
CHMP3-204ENST00000409727 SFRP4Q6FHJ7 346 aaPredicted RBP10.56□□□□□ -0.72
CHMP3-204ENST00000409727 FAM58AQ8N1B3 248 aa10.56□□□□□ -0.72
CHMP3-204ENST00000409727 OR4S1Q8NGB4 309 aa10.56□□□□□ -0.72
CHMP3-204ENST00000409727 OR4D10Q8NGI6 311 aa10.56□□□□□ -0.72
CHMP3-204ENST00000409727 PIK3IP1Q96FE7 263 aa10.56□□□□□ -0.72
CHMP3-204ENST00000409727 UBE2QL1A1L167 161 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 E7EQL1 145 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 SULT1C2O00338 296 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 SIAH2O43255 324 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 NXPH2O95156 264 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 CD3DP04234 171 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 MELTFP08582 738 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 GIFP27352 417 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 BTCP35070 178 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ACTBP60709 375 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ACTG1P63261 375 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 DAZAP2Q15038 168 aaPredicted RBP10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ELP2Q6IA86 826 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 OR52W1Q6IF63 320 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 C11orf53Q8IXP5 236 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ZNF843Q8N446 348 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 SPERTQ8NA61 448 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 MAFIPQ8WZ33 124 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 OR2V2Q96R30 315 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 SULT4A1Q9BR01 284 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 HDHD3Q9BSH5 251 aaPredicted RBP10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ZNF442Q9H7R0 627 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 C1orf123Q9NWV4 160 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ZNF230Q9UIE0 474 aaPredicted RBP10.55□□□□□ -0.72
CHMP3-204ENST00000409727 M0QYG6 137 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 WNT9BO14905 357 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 CSN2P05814 226 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 CHATP28329 748 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 SERPINF1P36955 418 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 DYRK1AQ13627 763 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ZCCHC24Q8N2G6 241 aaKnown RBP10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ST8SIA4Q92187 359 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ST6GALNAC5Q9BVH7 336 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 WDR13Q9H1Z4 485 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 ZNF701Q9NV72 531 aaPredicted RBP10.55□□□□□ -0.72
CHMP3-204ENST00000409727 TAS2R8Q9NYW2 309 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 TREM2Q9NZC2 230 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 AK3Q9UIJ7 227 aa10.55□□□□□ -0.72
CHMP3-204ENST00000409727 RALYQ9UKM9 306 aaKnown RBP10.55□□□□□ -0.72
CHMP3-204ENST00000409727 RNF115Q9Y4L5 304 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms