RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 PERPQ96FX8 193 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 POM121Q96HA1 1249 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 HMG20AQ9NP66 347 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 RBFOX1Q9NWB1 397 aaKnown RBP17.19■□□□□ 0.34
VSX1-203ENST00000409285 TREM2Q9NZC2 230 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 ING4Q9UNL4 249 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 ETV7Q9Y603 341 aa17.19■□□□□ 0.34
VSX1-203ENST00000409285 LYNX1G3V0Z9 82 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 NDUFS8O00217 210 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 NXPH2O95156 264 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 LYNX1P0DP58 116 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 ACP7Q6ZNF0 438 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 FAM58AQ8N1B3 248 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 ZNF525Q8N782 197 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 ZNF488Q96MN9 340 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 DCUN1D5Q9BTE7 237 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 SLIRPQ9GZT3 109 aaKnown RBP17.18■□□□□ 0.34
VSX1-203ENST00000409285 WDR13Q9H1Z4 485 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 SEBOXQ9HB31 216 aaPredicted RBP17.18■□□□□ 0.34
VSX1-203ENST00000409285 ELL3Q9HB65 397 aaPredicted RBP17.18■□□□□ 0.34
VSX1-203ENST00000409285 OR5V1Q9UGF6 321 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 DSCAML1Q8TD84 2053 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 OOEPA6NGQ2 149 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 SSX4O60224 188 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 CSTBP04080 98 aaKnown RBP17.18■□□□□ 0.34
VSX1-203ENST00000409285 GTF2F2P13984 249 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 RAB6AP20340 208 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 SERPINA2P20848 420 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 PDLIM4P50479 330 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 DSCR9P59020 149 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 BTG1P62324 171 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 UNC119Q13432 240 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 ZNF146Q15072 292 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 C2orf76Q3KRA6 126 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 SPIN3Q5JUX0 258 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 PEG10Q86TG7 708 aaKnown RBP17.18■□□□□ 0.34
VSX1-203ENST00000409285 EMG1Q92979 244 aaKnown RBP17.18■□□□□ 0.34
VSX1-203ENST00000409285 SPATA2Q9UM82 520 aa17.18■□□□□ 0.34
VSX1-203ENST00000409285 CREBBPQ92793 2442 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 PPIAL4EA0A075B759 164 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 PPIAL4DF5H284 164 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 WNT9BO14905 357 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 PPIAL4FP0DN26 164 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 MGMTP16455 207 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 FIP1L1Q6UN15 594 aaKnown RBP17.17■□□□□ 0.34
VSX1-203ENST00000409285 LINC00596Q86U02 117 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 OSR2Q8N2R0 312 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 TMEM104Q8NE00 496 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 OR10K1Q8NGX5 313 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 LGALS14Q8TCE9 139 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 TIMD4Q96H15 378 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 NXF2Q9GZY0 626 aaKnown RBP17.17■□□□□ 0.34
VSX1-203ENST00000409285 PPIAL4AQ9Y536 164 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 A3GALT2U3KPV4 340 aa17.17■□□□□ 0.34
VSX1-203ENST00000409285 AKAP9Q99996 3911 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 A0A0B4J203 849 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 TRAV38-1A0A0B4J264 116 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 TMEM272A0A1B0GTI8 110 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 A0A1W2PP11 408 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 LGALS8O00214 317 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 HTR3BO95264 441 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 KNG1P01042 644 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 IGHV2-70P01814 119 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 IL13RA2Q14627 380 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 FAM189A2Q15884 450 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 MICBQ29980 383 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 CLEC2AQ6UVW9 174 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 PRSS57Q6UWY2 283 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 RAB1CQ92928 201 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 TMEM59Q9BXS4 323 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 DNTTIP1Q9H147 329 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 NLKQ9UBE8 527 aa17.16■□□□□ 0.34
VSX1-203ENST00000409285 MYO9AB2RTY4 2548 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 A0A075B6Q4 140 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A10PA6NDY2 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A18PA6NE21 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A16PA6NEW6 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A20PA6NIJ5 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A8PA6NJQ4 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A7PA6NKC0 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A22PA8MWA6 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A12PA8MX19 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A5PA8MXJ8 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A23PA8MXZ1 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 CRTAPO75718 401 aaPredicted RBP17.15■□□□□ 0.34
VSX1-203ENST00000409285 PAHP00439 452 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A15PP0C7V4 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A13PP0C7W8 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A14PP0C7W9 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 FAM90A24PP0C7X0 464 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 SNRPBP14678 240 aaKnown RBP17.15■□□□□ 0.34
VSX1-203ENST00000409285 PRKACAP17612 351 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 RBMXP38159 391 aaKnown RBP17.15■□□□□ 0.34
VSX1-203ENST00000409285 MDH2P40926 338 aaKnown RBP17.15■□□□□ 0.34
VSX1-203ENST00000409285 RBM11P57052 281 aaKnown RBP17.15■□□□□ 0.34
VSX1-203ENST00000409285 RPS27AP62979 156 aaKnown RBP17.15■□□□□ 0.34
VSX1-203ENST00000409285 HOXA4Q00056 320 aaPredicted RBP17.15■□□□□ 0.34
VSX1-203ENST00000409285 ZMYND11Q15326 602 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 KCNJ8Q15842 424 aa17.15■□□□□ 0.34
VSX1-203ENST00000409285 ZNF404Q494X3 552 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms