RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 CMTM4Q8IZR5 234 aa14.8□□□□□ -0.04
PDLIM2-206ENST00000409141 SIGLECL1Q8N7X8 197 aa14.8□□□□□ -0.04
PDLIM2-206ENST00000409141 C8orf46Q8TAG6 207 aa14.8□□□□□ -0.04
PDLIM2-206ENST00000409141 RFT1Q96AA3 541 aa14.8□□□□□ -0.04
PDLIM2-206ENST00000409141 SPACA5Q96QH8 159 aa14.8□□□□□ -0.04
PDLIM2-206ENST00000409141 ELL3Q9HB65 397 aaPredicted RBP14.8□□□□□ -0.04
PDLIM2-206ENST00000409141 KPTNQ9Y664 436 aa14.8□□□□□ -0.04
PDLIM2-206ENST00000409141 A0A1W2PQ09 198 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 SPRY1O43609 319 aaPredicted RBP14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 SULT1B1O43704 296 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 ALX3O95076 343 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 LALBAP00709 142 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 HCKP08631 526 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 C21orf33P30042 268 aaPredicted RBP14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 PDZK1IP1Q13113 114 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 PDCD1Q15116 288 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 C6orf141Q5SZD1 244 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 BRD3OSQ6XYD6 125 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 Q8IYB0 196 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 RPS4Y2Q8TD47 263 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 RGP1Q92546 391 aaPredicted RBP14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 EMG1Q92979 244 aaKnown RBP14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 C19orf24Q9BVV8 132 aa14.79□□□□□ -0.04
PDLIM2-206ENST00000409141 CENPVL3A0A0U1RRI6 287 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 CD2P06729 351 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 BCL3P20749 454 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 NPBWR2P48146 333 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 BPIFB3P59826 476 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 C9orf139Q6ZV77 190 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 RNF144BQ7Z419 303 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 VMO1Q7Z5L0 202 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 ZNF485Q8NCK3 441 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 SPATA3Q8NHX4 192 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 GHSRQ92847 366 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 LHX4Q969G2 390 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 SMIM19Q96E16 107 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 FKBP14Q9NWM8 211 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 ZNF281Q9Y2X9 895 aa14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 SOX21Q9Y651 276 aaPredicted RBP14.78□□□□□ -0.04
PDLIM2-206ENST00000409141 PTGES3LE9PB15 166 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 TRIM77I1YAP6 450 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 MYL12BO14950 172 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 ANGPTL7O43827 346 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 CHRM2P08172 466 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 RAB3AP20336 220 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 COL10A1Q03692 680 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 DMKNQ6E0U4 476 aaPredicted RBP14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 FIP1L1Q6UN15 594 aaKnown RBP14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 FAM185AQ8N0U4 392 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 FAM58AQ8N1B3 248 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 KIR3DL3Q8N743 410 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 ZFP41Q8N8Y5 198 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 OR5D18Q8NGL1 313 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 RBFOX1Q9NWB1 397 aaKnown RBP14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 SCN3BQ9NY72 215 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 ERGIC3Q9Y282 383 aa14.77□□□□□ -0.04
PDLIM2-206ENST00000409141 TRBV23-1A0A0A0MS06 115 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 MAGEB3O15480 346 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 TK1P04183 234 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 CALCBP10092 127 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 WNT4P56705 351 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 TAS2R43P59537 309 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 KISS1Q15726 138 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 TUSC1Q2TAM9 212 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 IZUMO2Q6UXV1 221 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 NANOGP1Q8N7R0 232 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 ASCC1Q8N9N2 400 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 ZFAND2BQ8WV99 257 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 MYDGFQ969H8 173 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 TMEM106AQ96A25 262 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 ZNF48Q96MX3 618 aaPredicted RBP14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 ESM1Q9NQ30 184 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 TAS2R4Q9NYW5 299 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 STAB1Q9NY15 2570 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 ATP6V1G2O95670 118 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 CDK1P06493 297 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 TMEM225BP0DP42 221 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 PRKACAP17612 351 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 MYF6P23409 242 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 RPL31P62899 125 aaKnown RBP14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 BAMBIQ13145 260 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 RIPK1Q13546 671 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 RUSC1-AS1Q66K80 236 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 C1orf122Q6ZSJ8 110 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 PDZD9Q8IXQ8 264 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 ZDHHC22Q8N966 263 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 OR4M1Q8NGD0 313 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 FAM234AQ9H0X4 552 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 SIRT7Q9NRC8 400 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 C19orf12Q9NSK7 152 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 IL36RNQ9UBH0 155 aa14.76□□□□□ -0.05
PDLIM2-206ENST00000409141 IGHV1-69DA0A0B4J2H0 117 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 IGKV1-12A0A0C4DH73 117 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 PNMA8CA0A1B0GUJ8 204 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 K7N7A8 449 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 M0R1W7 72 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 HAND1O96004 215 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 IGKV1D-12P01611 117 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 IGHV1-69P01742 117 aa14.75□□□□□ -0.05
PDLIM2-206ENST00000409141 DUSP1P28562 367 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms