RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 DUSP1P28562 367 aa13.83□□□□□ -0.19
CCDC85A-201ENST00000407595 CALCRP30988 508 aa13.83□□□□□ -0.19
CCDC85A-201ENST00000407595 TSPO2Q5TGU0 170 aa13.83□□□□□ -0.19
CCDC85A-201ENST00000407595 BMPERQ8N8U9 685 aa13.83□□□□□ -0.19
CCDC85A-201ENST00000407595 MRPL22Q9NWU5 206 aaKnown RBP13.83□□□□□ -0.19
CCDC85A-201ENST00000407595 OR14J1Q9UGF5 321 aa13.83□□□□□ -0.19
CCDC85A-201ENST00000407595 CCDC187A0A096LP49 1063 aa13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 CD8AP01732 235 aa13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 IGKV3-11P04433 115 aa13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 EIF2S3P41091 472 aaKnown RBP13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 LPAR6P43657 344 aa13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 B2MP61769 119 aa13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 C6orf201Q7Z4U5 140 aa13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 RTN4IP1Q8WWV3 396 aaPredicted RBP13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 ZNF385AQ96PM9 386 aaKnown RBP13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 NIPSNAP3BQ9BS92 247 aa13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 TSTD3H0UI37 97 aa13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 CNOT4O95628 575 aaKnown RBP13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 TMEM123Q8N131 208 aa13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 OR10D4PQ8NGN7 298 aa13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 SAT2Q96F10 170 aaPredicted RBP13.83□□□□□ -0.2
CCDC85A-201ENST00000407595 KLRC4-KLRK1H3BQV0 150 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 FPR2P25090 351 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 CLEC12BQ2HXU8 276 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 CCDC71LQ8N9Z2 235 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 APCDD1LQ8NCL9 501 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 ABHD3Q8WU67 409 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 OR10C1Q96KK4 312 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 HES7Q9BYE0 225 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 NMES1Q9C002 83 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 DUSP13Q9UII6 198 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 KIF26AQ9ULI4 1882 aaPredicted RBP13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 ZFP92A6NM28 416 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 GPR37O15354 613 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 BGLAPP02818 100 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 CD63P08962 238 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 RPL23AP62750 156 aaKnown RBP13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 MRPS34P82930 218 aaKnown RBP13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 SLC10A1Q14973 349 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 ZNF260Q3ZCT1 412 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 DRAM2Q6UX65 266 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 OR10D3Q8NH80 312 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 KCNS2Q9ULS6 477 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 HLA-HP01893 362 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 H2AFB1P0C5Y9 115 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 LTC4SQ16873 150 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 C15orf54Q8N8G6 183 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 RPS4Y2Q8TD47 263 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 APH1AQ96BI3 265 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 IL17BQ9UHF5 180 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 HDGFL3Q9Y3E1 203 aa13.82□□□□□ -0.2
CCDC85A-201ENST00000407595 A0A087WZY1 265 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 C5orf49A4QMS7 147 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 LIPT2A6NK58 231 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 RAMP1O60894 148 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 DSCR4P56555 118 aaPredicted RBP13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 GGNBP1Q5YKI7 109 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 LIPHQ8WWY8 451 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 NCOR2Q9Y618 2525 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 ZNF587BE7ETH6 402 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 CST7O76096 145 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 RAB11AP62491 216 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 RPS4XP62701 263 aaKnown RBP13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 BEND4Q6ZU67 534 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 NOXO1Q8NFA2 376 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 GPX7Q96SL4 187 aaPredicted RBP13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 SSX3Q99909 188 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 METTL9Q9H1A3 318 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 C19orf12Q9NSK7 152 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 GAR1Q9NY12 217 aaKnown RBP13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 AK3Q9UIJ7 227 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 LOC101059948A0A1B0GTJ6 334 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 E5RGE8 158 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 TOX3O15405 576 aaPredicted RBP13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 CYB5BO43169 146 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 YIF1AO95070 293 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 SMIM6P0DI80 62 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 GSK3AP49840 483 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 ZNF774Q6NX45 483 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 FAHD2BQ6P2I3 314 aaPredicted RBP13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 TMEM105Q8N8V8 129 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 FAHD2AQ96GK7 314 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 PRO1933Q9H354 126 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 NSG2Q9Y328 171 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 PMS2P1A4D2B8 440 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 CDC14BO60729 498 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 RAB5AP20339 215 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 RRADP55042 308 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 ZNF239Q16600 458 aaKnown RBP13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 DHRS11Q6UWP2 260 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 OCSTAMPQ9BR26 566 aa13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 ESRP2Q9H6T0 727 aaKnown RBP13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 RCC2Q9P258 522 aaKnown RBP13.81□□□□□ -0.2
CCDC85A-201ENST00000407595 C2orf16Q68DN1 1984 aa13.8□□□□□ -0.2
CCDC85A-201ENST00000407595 DOK3Q7L591 496 aa13.8□□□□□ -0.2
CCDC85A-201ENST00000407595 UBALD1Q8TB05 177 aa13.8□□□□□ -0.2
CCDC85A-201ENST00000407595 RRNAD1Q96FB5 475 aaKnown RBP13.8□□□□□ -0.2
CCDC85A-201ENST00000407595 PCDH15Q96QU1 1955 aa13.8□□□□□ -0.2
CCDC85A-201ENST00000407595 SPRY1O43609 319 aaPredicted RBP13.8□□□□□ -0.2
CCDC85A-201ENST00000407595 EFNA3P52797 238 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms