RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 EXOSC2Q13868 293 aaKnown RBP11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 SURF2Q15527 256 aaPredicted RBP11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 SLC22A6Q4U2R8 563 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 C6orf183Q5T699 404 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 PLXDC2Q6UX71 529 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 TMUB2Q71RG4 321 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 HOGA1Q86XE5 327 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 OR5M8Q8NGP6 311 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 OR13C8Q8NGS7 320 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 FAM57AQ8TBR7 257 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 MITD1Q8WV92 249 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 FBXO17Q96EF6 278 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 WDYHV1Q96HA8 205 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 LYZL4Q96KX0 146 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 MDFIQ99750 246 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 SMR3AQ99954 134 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 PDCD10Q9BUL8 212 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 GSX2Q9BZM3 304 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 LIME1Q9H400 295 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 GPR35Q9HC97 309 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 KCNJ16Q9NPI9 418 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF319Q9P2F9 582 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 KCNK7Q9Y2U2 307 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 NOSIPQ9Y314 301 aaKnown RBP11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 JMJD1CQ15652 2540 aa11.17□□□□□ -0.62
SMARCB1-203ENST00000407082 FXYD6-FXYD2A0A087WZ82 144 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 G3V3Q6 166 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 MFNGO00587 321 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 TPD52L2O43399 206 aaKnown RBP11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 OR2F2O95006 317 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 DUS4LO95620 317 aaKnown RBP11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 LCATP04180 440 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 SLC25A4P12235 298 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 MGMTP16455 207 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF708P17019 499 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 AMY2BP19961 511 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 ZBTB25P24278 435 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 BLVRBP30043 206 aaPredicted RBP11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 HTR5AP47898 357 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 RBP2P50120 134 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 FUT6P51993 359 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 CLDN15P56746 228 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 CLDN18P56856 261 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 OR2F1Q13607 317 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 RNPS1Q15287 305 aaKnown RBP11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 KRTAP27-1Q3LI81 207 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 TMEM128Q5BJH2 165 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF585AQ6P3V2 769 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 PEG10Q86TG7 708 aaKnown RBP11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 SLC51BQ86UW2 128 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 TMEM185AQ8NFB2 350 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 COQ8AQ8NI60 647 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 FBXW5Q969U6 566 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 SGK3Q96BR1 496 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 BORCS8Q96FH0 119 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 REEP6Q96HR9 211 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 C1orf147Q96MC9 270 aaPredicted RBP11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 DMRTA2Q96SC8 542 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 PRRG4Q9BZD6 226 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 PRDM14Q9GZV8 571 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 CHST6Q9GZX3 395 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 FXYD6Q9H0Q3 95 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 CXXC4Q9H2H0 198 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 ELL3Q9HB65 397 aaPredicted RBP11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF224Q9NZL3 707 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 AUP1Q9Y679 476 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 SESN1Q9Y6P5 492 aa11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 FLNAP21333 2647 aaKnown RBP11.16□□□□□ -0.62
SMARCB1-203ENST00000407082 IGKV1-9A0A0C4DH69 117 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 C9orf170A2RU37 121 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 CEACAM18A8MTB9 384 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF724A8MTY0 619 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 AHRRA9YTQ3 701 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 RPL36A-HNRNPH2H7BZ11 118 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 SOCS1O15524 211 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 B3GALNT1O75752 331 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 CSN2P05814 226 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 TMEM225BP0DP42 221 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 FOSL1P15407 271 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 FAHP16930 419 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF32P17041 273 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 FPR2P25090 351 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 MTCP1P56278 107 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 UBA52P62987 128 aaKnown RBP11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF345Q14585 488 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 RSU1Q15404 277 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 NKPD1Q17RQ9 610 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 CEACAM16Q2WEN9 425 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 GSG1LQ6UXU4 331 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 ZNF546Q86UE3 836 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 DMRTC2Q8IXT2 367 aaPredicted RBP11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 OR4S1Q8NGB4 309 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 OR6K3Q8NGY3 331 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 THAP6Q8TBB0 222 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 SCARB1Q8WTV0 552 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 ROBO4Q8WZ75 1007 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 CMBLQ96DG6 245 aa11.15□□□□□ -0.62
SMARCB1-203ENST00000407082 CITED4Q96RK1 184 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms