RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 LDLRAD4O15165 306 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 PPIHO43447 177 aaKnown RBP10.33□□□□□ -0.76
LINC00339-201ENST00000404210 NDUFA2O43678 99 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 GTF2F2P13984 249 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 SERPINA2P20848 420 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 RBMXP38159 391 aaKnown RBP10.33□□□□□ -0.76
LINC00339-201ENST00000404210 GPR6P46095 362 aaPredicted RBP10.33□□□□□ -0.76
LINC00339-201ENST00000404210 FGF12P61328 243 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 KCNJ8Q15842 424 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 MICBQ29980 383 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 SLC22A6Q4U2R8 563 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 NHLRC3Q5JS37 347 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 FAM201AQ5SY85 155 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 FIP1L1Q6UN15 594 aaKnown RBP10.33□□□□□ -0.76
LINC00339-201ENST00000404210 CLEC2AQ6UVW9 174 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 LRRC28Q86X40 367 aaPredicted RBP10.33□□□□□ -0.76
LINC00339-201ENST00000404210 OSR2Q8N2R0 312 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 ZNF525Q8N782 197 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 BOLLQ8N9W6 283 aaKnown RBP10.33□□□□□ -0.76
LINC00339-201ENST00000404210 OR10K1Q8NGX5 313 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 ACOT12Q8WYK0 555 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 FAM168AQ92567 244 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 EMG1Q92979 244 aaKnown RBP10.33□□□□□ -0.76
LINC00339-201ENST00000404210 FOXC2Q99958 501 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 CST11Q9H112 138 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 WDR13Q9H1Z4 485 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 LIN7BQ9HAP6 207 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 RBFOX1Q9NWB1 397 aaKnown RBP10.33□□□□□ -0.76
LINC00339-201ENST00000404210 CCDC59Q9P031 241 aaKnown RBP10.33□□□□□ -0.76
LINC00339-201ENST00000404210 NLKQ9UBE8 527 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 OR5V1Q9UGF6 321 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 RAB22AQ9UL26 194 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 SPATA2Q9UM82 520 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 ARID1AO14497 2285 aa10.33□□□□□ -0.76
LINC00339-201ENST00000404210 SPG11Q96JI7 2443 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 TMEM272A0A1B0GTI8 110 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 CRTAPO75718 401 aaPredicted RBP10.32□□□□□ -0.76
LINC00339-201ENST00000404210 KNG1P01042 644 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 IGHV2-70P01814 119 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 PRKACAP17612 351 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 RAB6AP20340 208 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 CD80P33681 288 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 MDH2P40926 338 aaKnown RBP10.32□□□□□ -0.76
LINC00339-201ENST00000404210 BTG1P62324 171 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 IL13RA2Q14627 380 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 ZNF146Q15072 292 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 FAM189A2Q15884 450 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 CARTPTQ16568 116 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 CLEC12BQ2HXU8 276 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 SMIM21Q3B7S5 101 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 TMEM155Q4W5P6 130 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 SPIN3Q5JUX0 258 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 ATPAF1Q5TC12 328 aaPredicted RBP10.32□□□□□ -0.76
LINC00339-201ENST00000404210 SHEQ5VZ18 495 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 SFRP4Q6FHJ7 346 aaPredicted RBP10.32□□□□□ -0.76
LINC00339-201ENST00000404210 MZT2AQ6P582 158 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 BATF2Q8N1L9 274 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 MUC20Q8N307 709 aaPredicted RBP10.32□□□□□ -0.76
LINC00339-201ENST00000404210 C10orf105Q8TEF2 133 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 AP3S1Q92572 193 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 CMTM3Q96MX0 182 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 PIMREGQ9BSJ6 248 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 DNAJB11Q9UBS4 358 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 GLS2Q9UI32 602 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 ST3GAL6Q9Y274 331 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 WIPI2Q9Y4P8 454 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 ETV7Q9Y603 341 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 LRBAP50851 2863 aa10.32□□□□□ -0.76
LINC00339-201ENST00000404210 CRYBG3Q68DQ2 2970 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 A0A075B6Q4 140 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 A0A0B4J203 849 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 A0A1W2PP11 408 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 RFPL4AA6NLU0 287 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 OR2AT4A6NND4 320 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 VWC2LB2RUY7 222 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 C3orf80F5H4A9 247 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 RFPL4AL1F8VTS6 287 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 SH2D1BO14796 132 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 ZNF205O95201 554 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 MPIG6BO95866 241 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 PAHP00439 452 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 PSG2P11465 335 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 SNRPBP14678 240 aaKnown RBP10.31□□□□□ -0.76
LINC00339-201ENST00000404210 MGMTP16455 207 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 CPT2P23786 658 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 GMFBP60983 142 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 HOXA4Q00056 320 aaPredicted RBP10.31□□□□□ -0.76
LINC00339-201ENST00000404210 UNC119Q13432 240 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 ZMYND11Q15326 602 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 ZNF404Q494X3 552 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 OR10K2Q6IF99 312 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 LINC00596Q86U02 117 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 TMEM104Q8NE00 496 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 C19orf18Q8NEA5 215 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 DEFB108BQ8NET1 73 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 ANGPTL6Q8NI99 470 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 SEH1LQ96EE3 360 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 URM1Q9BTM9 101 aaKnown RBP10.31□□□□□ -0.76
LINC00339-201ENST00000404210 TM2D1Q9BX74 207 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 DNTTIP1Q9H147 329 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms