RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 TMEM106AQ96A25 262 aa15.87■□□□□ 0.13
RTN4-207ENST00000402434 DCTN5Q9BTE1 182 aa15.87■□□□□ 0.13
RTN4-207ENST00000402434 CNTD2Q9H8S5 307 aa15.87■□□□□ 0.13
RTN4-207ENST00000402434 TRBV5-5A0A0J9YX44 114 aa15.86■□□□□ 0.13
RTN4-207ENST00000402434 CD1AP06126 327 aa15.86■□□□□ 0.13
RTN4-207ENST00000402434 MMP9P14780 707 aa15.86■□□□□ 0.13
RTN4-207ENST00000402434 CRHBPP24387 322 aa15.86■□□□□ 0.13
RTN4-207ENST00000402434 ACSM1Q08AH1 577 aa15.86■□□□□ 0.13
RTN4-207ENST00000402434 TUSC1Q2TAM9 212 aa15.86■□□□□ 0.13
RTN4-207ENST00000402434 ZNF561Q8N587 486 aa15.86■□□□□ 0.13
RTN4-207ENST00000402434 ZFP41Q8N8Y5 198 aa15.86■□□□□ 0.13
RTN4-207ENST00000402434 SPACA5Q96QH8 159 aa15.86■□□□□ 0.13
RTN4-207ENST00000402434 SEBOXQ9HB31 216 aaPredicted RBP15.86■□□□□ 0.13
RTN4-207ENST00000402434 NUP50Q9UKX7 468 aa15.86■□□□□ 0.13
RTN4-207ENST00000402434 RRP15Q9Y3B9 282 aaKnown RBP15.86■□□□□ 0.13
RTN4-207ENST00000402434 CYB5AP00167 134 aa15.85■□□□□ 0.13
RTN4-207ENST00000402434 RAB3AP20336 220 aa15.85■□□□□ 0.13
RTN4-207ENST00000402434 POU3F4P49335 361 aa15.85■□□□□ 0.13
RTN4-207ENST00000402434 IRF3Q14653 427 aa15.85■□□□□ 0.13
RTN4-207ENST00000402434 KISS1Q15726 138 aa15.85■□□□□ 0.13
RTN4-207ENST00000402434 SAXO1Q8IYX7 474 aa15.85■□□□□ 0.13
RTN4-207ENST00000402434 WDFY2Q96P53 400 aa15.85■□□□□ 0.13
RTN4-207ENST00000402434 MND1Q9BWT6 205 aa15.85■□□□□ 0.13
RTN4-207ENST00000402434 SIRPDQ9H106 197 aa15.85■□□□□ 0.13
RTN4-207ENST00000402434 A0A0A6YYJ9 748 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 IGKV1-12A0A0C4DH73 117 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 SPRY1O43609 319 aaPredicted RBP15.84■□□□□ 0.13
RTN4-207ENST00000402434 IGKV1D-12P01611 117 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 CELP19835 753 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 NPBWR2P48146 333 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 CEBPDP49716 269 aaPredicted RBP15.84■□□□□ 0.13
RTN4-207ENST00000402434 SPHARQ15513 63 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 Q499Y3 187 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 USP43Q70EL4 1123 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 ZSCAN4Q8NAM6 433 aaPredicted RBP15.84■□□□□ 0.13
RTN4-207ENST00000402434 TMEM185AQ8NFB2 350 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 OR51A2Q8NGJ7 313 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 OR13C5Q8NGS8 318 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 RFT1Q96AA3 541 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 CNBD2Q96M20 576 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 OCEL1Q9H607 264 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 RHOFQ9HBH0 211 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 RBFOX1Q9NWB1 397 aaKnown RBP15.84■□□□□ 0.13
RTN4-207ENST00000402434 TAS2R4Q9NYW5 299 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 LSM2Q9Y333 95 aaKnown RBP15.84■□□□□ 0.13
RTN4-207ENST00000402434 KPTNQ9Y664 436 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 TCF21O43680 179 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 TOX4O94842 621 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 KDM4BO94953 1096 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 INMTO95050 263 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 SFTPBP07988 381 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 HCKP08631 526 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 IGHV4-38-2P0DP08 117 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 NDUFB7P17568 137 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 BCL3P20749 454 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 FPR2P25090 351 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 ZP1P60852 638 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 ARF6P62330 175 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 FAM58AQ8N1B3 248 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 OR5M11Q96RB7 305 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 TBX15Q96SF7 602 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 FAM234AQ9H0X4 552 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 OR14J1Q9UGF5 321 aa15.84■□□□□ 0.13
RTN4-207ENST00000402434 TRBV23-1A0A0A0MS06 115 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 ANGPTL7O43827 346 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 GPX5O75715 221 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 ALDOBP05062 364 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 ZNF146Q15072 292 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 METTL11BQ5VVY1 283 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 KIR3DL3Q8N743 410 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 OR5D18Q8NGL1 313 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 H1FXQ92522 213 aaKnown RBP15.83■□□□□ 0.12
RTN4-207ENST00000402434 EMG1Q92979 244 aaKnown RBP15.83■□□□□ 0.12
RTN4-207ENST00000402434 CPNE2Q96FN4 548 aaPredicted RBP15.83■□□□□ 0.12
RTN4-207ENST00000402434 ZNF184Q99676 751 aaPredicted RBP15.83■□□□□ 0.12
RTN4-207ENST00000402434 MDFIQ99750 246 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 PCGF1Q9BSM1 259 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 HMG20AQ9NP66 347 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 TMEM138Q9NPI0 162 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 ZNF69Q9UC07 566 aa15.83■□□□□ 0.12
RTN4-207ENST00000402434 TRBV5-7A0A0A0MS05 114 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 PNMA8CA0A1B0GUJ8 204 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 K7N7A8 449 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 MAGEB3O15480 346 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 RGS10O43665 173 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 ZNF737O75373 536 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 TK1P04183 234 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 CHRM2P08172 466 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 IGFBP3P17936 291 aaPredicted RBP15.82■□□□□ 0.12
RTN4-207ENST00000402434 SPIN3Q5JUX0 258 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 RBM48Q5RL73 367 aaKnown RBP15.82■□□□□ 0.12
RTN4-207ENST00000402434 C1orf122Q6ZSJ8 110 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 C9orf139Q6ZV77 190 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 PRSS48Q7RTY5 328 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 OR52N4Q8NGI2 321 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 ZNF418Q8TF45 676 aaPredicted RBP15.82■□□□□ 0.12
RTN4-207ENST00000402434 ELL3Q9HB65 397 aaPredicted RBP15.82■□□□□ 0.12
RTN4-207ENST00000402434 IL36RNQ9UBH0 155 aa15.82■□□□□ 0.12
RTN4-207ENST00000402434 TRAV40A0A0B4J280 105 aa15.81■□□□□ 0.12
RTN4-207ENST00000402434 DENRO43583 198 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms