RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 FBXO34Q9NWN3 711 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 RNF186Q9NXI6 227 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 PTRH2Q9Y3E5 179 aaKnown RBP8.87□□□□□ -0.99
PTPRM-203ENST00000400060 TIMM8BQ9Y5J9 83 aaPredicted RBP8.87□□□□□ -0.99
PTPRM-203ENST00000400060 STRCQ7RTU9 1775 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 CITO14578 2027 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 TIMP1P01033 207 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 SOD3P08294 240 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 ASCL1P50553 236 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 RPL24P83731 157 aaKnown RBP8.87□□□□□ -0.99
PTPRM-203ENST00000400060 EIF3IQ13347 325 aaKnown RBP8.87□□□□□ -0.99
PTPRM-203ENST00000400060 C2orf68Q2NKX9 166 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 FAM57BQ71RH2 274 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 BHLHA9Q7RTU4 235 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 BPIFA4PQ86YQ2 179 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 PBOV1Q9GZY1 135 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 LPAR5Q9H1C0 372 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 GCM1Q9NP62 436 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 LHX9Q9NQ69 397 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF346Q9UL40 294 aaKnown RBP8.87□□□□□ -0.99
PTPRM-203ENST00000400060 B9D1Q9UPM9 204 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 SLC22A13Q9Y226 551 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 FUT3P21217 361 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 TCTAP57738 103 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 CCSMST1Q4G0I0 132 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 C2orf27AQ580R0 203 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 LHFPL2Q6ZUX7 228 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 TMEM25Q86YD3 366 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 TNFRSF14Q92956 283 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 IMMP2LQ96T52 175 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 VN1R1Q9GZP7 353 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 TUBD1Q9UJT1 453 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 HSF4Q9ULV5 492 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 PHIPQ8WWQ0 1821 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 CTXND1A0A1B0GTU2 59 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 A0A1W2PPE3 182 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 TMEM250H0YL14 139 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 AMBPP02760 352 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 RTL8BQ17RB0 113 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF880Q6PDB4 577 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 FBXO46Q6PJ61 603 aaPredicted RBP8.87□□□□□ -0.99
PTPRM-203ENST00000400060 SPNS2Q8IVW8 549 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 PPIL1Q9Y3C6 166 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 M0R2Z0 102 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 B4GALT2O60909 372 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 TAS2R45P59539 299 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF260Q3ZCT1 412 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 OR2V1Q8NHB1 315 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 COL25A1Q9BXS0 654 aaPredicted RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 HDAC8Q9BY41 377 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 C3orf85A0A1B0GTC6 90 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 TRAPPC2LH3BP13 241 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 NPIPB7O75200 414 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 TMIGD3P0DMS9 266 aaPredicted RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 EXOSC7Q15024 291 aaKnown RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 C1orf100Q5SVJ3 147 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 MAML2Q8IZL2 1156 aaPredicted RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 OR4X1Q8NH49 305 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 C20orf144Q9BQM9 153 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 FAAP24Q9BTP7 215 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 KIR3DX1Q9H7L2 352 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 LRP12Q9Y561 859 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 NPIPA3F8WFD2 350 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 EREGO14944 169 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 HAND1O96004 215 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 UMODP07911 640 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 CLDN2P57739 230 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 RPL18Q07020 188 aaKnown RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 TGIF1Q15583 401 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 ADAMTSL4Q6UY14 1074 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 THSD4Q6ZMP0 1018 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 OR4N2Q8NGD1 307 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 SGIP1Q9BQI5 828 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 WDR61Q9GZS3 305 aaKnown RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 VCX2Q9H322 139 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 C20orf141Q9NUB4 165 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 RALYQ9UKM9 306 aaKnown RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 SBF2Q86WG5 1849 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 LILRB3O75022 631 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 CA11O75493 328 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 KBTBD11O94819 623 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 TNFSF15O95150 251 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 TNFP01375 233 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 KLK2P20151 261 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 IGFBP4P22692 258 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 MDH2P40926 338 aaKnown RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 RPS21P63220 83 aaKnown RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 SGCBQ16585 318 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 C1orf140Q5VVS0 124 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF664Q8N3J9 261 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 MRPL30Q8TCC3 161 aaKnown RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 PP6455Q8WZ26 134 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 FGF13Q92913 245 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 MRPL38Q96DV4 380 aaKnown RBP8.86□□□□□ -0.99
PTPRM-203ENST00000400060 ZPBPQ9BS86 351 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 RBKSQ9H477 322 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 TMEM30AQ9NV96 361 aa8.86□□□□□ -0.99
PTPRM-203ENST00000400060 ANKRD31Q8N7Z5 1873 aa8.85□□□□□ -0.99
PTPRM-203ENST00000400060 RHBDL1O75783 438 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms