RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PRICKLE4Q2TBC4 344 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 KLHDC8BQ8IXV7 354 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 DYNC2LI1Q8TCX1 351 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 NOL4LQ96MY1 436 aaPredicted RBP12.22□□□□□ -0.45
VAPA-202ENST00000400000 IGHV3OR16-10A0A075B7F0 116 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 SFTA3P0C7M3 94 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 LGALS7P47929 136 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 RNPS1Q15287 305 aaKnown RBP12.22□□□□□ -0.45
VAPA-202ENST00000400000 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 RASL11BQ9BPW5 248 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 PECRQ9BY49 303 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 OR5V1Q9UGF6 321 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 NAT8BQ9UHF3 227 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 PHOX2AO14813 284 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 ST8SIA5O15466 376 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 CALHM3Q86XJ0 350 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 APOBEC4Q8WW27 367 aaKnown RBP12.22□□□□□ -0.45
VAPA-202ENST00000400000 PHYHIPQ92561 330 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 HGDQ93099 445 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 MOGAT1Q96PD6 335 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 FLRT3Q9NZU0 649 aa12.22□□□□□ -0.45
VAPA-202ENST00000400000 ACSM4P0C7M7 580 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 EPHA8P29322 1005 aaPredicted RBP12.21□□□□□ -0.45
VAPA-202ENST00000400000 C1QL3Q5VWW1 255 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 RBPMS2Q6ZRY4 209 aaKnown RBP12.21□□□□□ -0.45
VAPA-202ENST00000400000 TINAGQ9UJW2 476 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 SLC38A11Q08AI6 406 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 SEZ6L2Q6UXD5 910 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 HSD17B13Q7Z5P4 300 aaPredicted RBP12.21□□□□□ -0.45
VAPA-202ENST00000400000 OR8B3Q8NGG8 313 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 OR8B2Q96RD0 313 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 NRAPQ86VF7 1730 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 ARG1P05089 322 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 CDKN2AP42771 156 aaKnown RBP12.21□□□□□ -0.45
VAPA-202ENST00000400000 PTGFRP43088 359 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 NHLRC2Q8NBF2 726 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 OR5C1Q8NGR4 320 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 RTN4RQ9BZR6 473 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 SRD5A3Q9H8P0 318 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 CNTD2Q9H8S5 307 aa12.21□□□□□ -0.45
VAPA-202ENST00000400000 C3orf85A0A1B0GTC6 90 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 MBP02144 154 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 HTR1DP28221 377 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 IL11RAQ14626 422 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 SSMEM1Q8WWF3 244 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 HILPDAQ9Y5L2 63 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 KNL1Q8NG31 2342 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 BRWD1Q9NSI6 2320 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 TAAR5O14804 337 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 EVX1P49640 407 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 SELENOPP49908 381 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 OR4D10Q8NGI6 311 aa12.21□□□□□ -0.46
VAPA-202ENST00000400000 DDOSTP39656 456 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 WNT5AP41221 380 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 HIST1H3AP68431 136 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 DGAT2L7PQ6IED9 249 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 ZNF574Q6ZN55 896 aaPredicted RBP12.2□□□□□ -0.46
VAPA-202ENST00000400000 PTPRZ1P23471 2315 aaPredicted RBP12.2□□□□□ -0.46
VAPA-202ENST00000400000 ORM1P02763 201 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 SP1P08047 785 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 PSMB2P49721 201 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 GNG4P50150 75 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 OR1K1Q8NGR3 316 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 AURKAIP1Q9NWT8 199 aaPredicted RBP12.2□□□□□ -0.46
VAPA-202ENST00000400000 SIRT5Q9NXA8 310 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 CDIPTO14735 213 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 NHLRC1Q6VVB1 395 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 IGHV3-72A0A0B4J1Y9 119 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 HSBP1O75506 76 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 IGLV3-25P01717 112 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 CADM4Q8NFZ8 388 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 OR2M3Q8NG83 312 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 SAP30LQ9HAJ7 183 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 LOC389332A0A1B0GUA5 103 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 LILRA5A6NI73 299 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 IGHA1P01876 353 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 IGHA2P01877 340 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 HNRNPA3P51991 378 aaKnown RBP12.2□□□□□ -0.46
VAPA-202ENST00000400000 OR52L2PQ8NGH6 319 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 PRO1933Q9H354 126 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 RHOFQ9HBH0 211 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 RAB5AP20339 215 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 BMI1P35226 326 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 OR4D9Q8NGE8 314 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 UCN2Q96RP3 112 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 SEBOXQ9HB31 216 aaPredicted RBP12.2□□□□□ -0.46
VAPA-202ENST00000400000 ZFP64Q9NPA5 681 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 ASCL3Q9NQ33 180 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 PRDM6Q9NQX0 595 aa12.2□□□□□ -0.46
VAPA-202ENST00000400000 H3BVH4 76 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 SULT1A1P50225 295 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 TMEM211Q6ICI0 200 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 ZNF841Q6ZN19 808 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 DNAJB12Q9NXW2 375 aaKnown RBP12.19□□□□□ -0.46
VAPA-202ENST00000400000 FOXJ3Q9UPW0 622 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 FZD6O60353 706 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 C1QBP02746 253 aa12.19□□□□□ -0.46
VAPA-202ENST00000400000 PJVKQ0ZLH3 352 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms