RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 C6orf141Q5SZD1 244 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ASPHD2Q6ICH7 369 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 LHFPL2Q6ZUX7 228 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 USP43Q70EL4 1123 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PDZD9Q8IXQ8 264 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 STX19Q8N4C7 294 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PARP16Q8N5Y8 322 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SIGLECL1Q8N7X8 197 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OR5D18Q8NGL1 313 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OR5D14Q8NGL3 314 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OR13C5Q8NGS8 318 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OR52N1Q8NH53 320 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RPS4Y2Q8TD47 263 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SGCDQ92629 289 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SPSB1Q96BD6 273 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ZNF48Q96MX3 618 aaPredicted RBP11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ESM1Q9NQ30 184 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RBFOX1Q9NWB1 397 aaKnown RBP11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 FKBP14Q9NWM8 211 aa11.61□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CENPVL3A0A0U1RRI6 287 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PNMA8CA0A1B0GUJ8 204 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PTGES3LE9PB15 166 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SLC1A7O00341 560 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ANGPTL7O43827 346 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 BCL3P20749 454 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PDZK1IP1Q13113 114 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MED21Q13503 144 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TUSC1Q2TAM9 212 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RUSC1-AS1Q66K80 236 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 IZUMO2Q6UXV1 221 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 C8orf46Q8TAG6 207 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 GHSRQ92847 366 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ORAI1Q96D31 301 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SMIM19Q96E16 107 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 C19orf24Q9BVV8 132 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SUCNR1Q9BXA5 334 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 A0A0A6YYJ9 748 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 IGKV1-12A0A0C4DH73 117 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SULT1B1O43704 296 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 KNG1P01042 644 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 IGKV1D-12P01611 117 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MT-ND2P03891 347 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 HCKP08631 526 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 RPSAP08865 295 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 DUSP1P28562 367 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 COL10A1Q03692 680 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 GPR157Q5UAW9 335 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 DMKNQ6E0U4 476 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 VMO1Q7Z5L0 202 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MKXQ8IYA7 352 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ZNF561Q8N587 486 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OR51A2Q8NGJ7 313 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 GPR148Q8TDV2 347 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 EMG1Q92979 244 aaKnown RBP11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 LHX4Q969G2 390 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TMEM106AQ96A25 262 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 DUX5Q96PT3 197 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 NKX3-1Q99801 234 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SIRT7Q9NRC8 400 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PAK1IP1Q9NWT1 392 aaPredicted RBP11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 TAS2R4Q9NYW5 299 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ZNF281Q9Y2X9 895 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 KPTNQ9Y664 436 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MDFIC2A0A1B0GVS7 189 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 A0A1W2PQ09 198 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ATP6V1G2O95670 118 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 CYB5AP00167 134 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MYF6P23409 242 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 SNU13P55769 128 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 KISS1Q15726 138 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 Q8N7P7 452 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ZDHHC22Q8N966 263 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 ASCC1Q8N9N2 400 aaKnown RBP11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 OR4M1Q8NGD0 313 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 PGLYRP3Q96LB9 341 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 VCX3BQ9H321 246 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 C19orf12Q9NSK7 152 aa11.59□□□□□ -0.55
HLA-DQB1-202ENST00000399079 MYL12BO14950 172 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 ALX3O95076 343 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 TK1P04183 234 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 CDK1P06493 297 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 PRKACAP17612 351 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 RAB3AP20336 220 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 WNT4P56705 351 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 RPS11P62280 158 aaKnown RBP eCLIP11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 ZNF529Q6P280 563 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 RBMS3Q6XE24 437 aaKnown RBP11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 C9orf139Q6ZV77 190 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 FAM185AQ8N0U4 392 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 FAM58AQ8N1B3 248 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 NANOGP1Q8N7R0 232 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 C1orf147Q96MC9 270 aaPredicted RBP11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 ANKRD60Q9BZ19 345 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 NEK6Q9HC98 313 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 PCDHGB5Q9Y5G0 923 aa11.58□□□□□ -0.56
HLA-DQB1-202ENST00000399079 MEX3AA1L020 520 aaKnown RBP11.57□□□□□ -0.56
HLA-DQB1-202ENST00000399079 K7N7A8 449 aa11.57□□□□□ -0.56
HLA-DQB1-202ENST00000399079 ZNF737O75373 536 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms