RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 MPZP25189 248 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ECI1P42126 302 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 DPTQ07507 201 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 SRSF4Q08170 494 aaKnown RBP5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ODF4Q2M2E3 257 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ELFN2Q5R3F8 820 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 CD276Q5ZPR3 534 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ARL9Q6T311 187 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 SLC35E3Q7Z769 313 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 OR5K2Q8NHB8 316 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ENTPD2Q9Y5L3 495 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ITPR1Q14643 2758 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 MUC6Q6W4X9 2439 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 KIR2DL5BA0A0G2JN68 375 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 KIR2DL5BA0A0G2JPC4 375 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM269A0A1B0GVZ9 245 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 IFITM10A6NMD0 228 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 ERI3O43414 337 aaKnown RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF432O94892 652 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 YIF1AO95070 293 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 SFTPBP07988 381 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 GAS1P54826 345 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 SNAI3Q3KNW1 292 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 DGAT2L7PQ6IED9 249 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 EIF5AL1Q6IS14 154 aaKnown RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 MBOAT2Q6ZWT7 520 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 HMGN2P46Q86SG4 172 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 OAFQ86UD1 273 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 MEX3DQ86XN8 651 aaKnown RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 KIR2DL5AQ8N109 375 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 KIR2DL5BQ8NHK3 375 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 UCN3Q969E3 161 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 NUDT22Q9BRQ3 303 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF649Q9BS31 505 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 RSPO3Q9BXY4 272 aaPredicted RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 OR51J1Q9H342 316 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 CLDND1Q9NY35 253 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 BRWD1Q9NSI6 2320 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 CGB1A6NKQ9 187 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF878C9JN71 531 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 G3V4G9 280 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 UMODP07911 640 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 HIST1H1EP10412 219 aaKnown RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 OPRD1P41143 372 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 RPL29P47914 159 aaKnown RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 NPBWR1P48145 328 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 EBPQ15125 230 aaKnown RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM225Q6GV28 225 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 FTMTQ8N4E7 242 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 GALNT14Q96FL9 552 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 OR10C1Q96KK4 312 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 NRIP2Q9BQI9 281 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 WFDC6Q9BQY6 131 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 SLC25A32Q9H2D1 315 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 LINC00597Q9H2U6 94 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 RCE1Q9Y256 329 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 FOXA2Q9Y261 457 aaPredicted RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 PPIAL4AQ9Y536 164 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 HELZP42694 1942 aaKnown RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 CACNA1AO00555 2505 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 ANKRD20A5PA0PJZ0 165 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 ABOP16442 354 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 PTGER1P34995 402 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 S100A10P60903 97 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 RHEBQ15382 184 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 INO80EQ8NBZ0 244 aaPredicted RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 OR51Q1Q8NH59 317 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 SCARF2Q96GP6 870 aaPredicted RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 CHIAQ9BZP6 476 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 LAT2Q9GZY6 243 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 Q9N2J8 555 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 AURKAIP1Q9NWT8 199 aaPredicted RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 PRODH2Q9UF12 536 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 AK6Q9Y3D8 172 aaKnown RBP5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 EML5Q05BV3 1969 aa5.79□□□□□ -1.48
TM9SF4-202ENST00000398022 A0A0A6YYD5 115 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 TVP23AA6NH52 213 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 UNC119BA6NIH7 251 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM90A8PA6NJQ4 464 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 RIIAD1A6NNX1 92 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 PYCARD-AS1I3L0S3 204 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 K7ESM1 405 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 IFNL4K9M1U5 179 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 MAN2B1O00754 1011 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 SYT7O43581 403 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 GCGP01275 180 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 ALDOBP05062 364 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM90A13PP0C7W8 464 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM90A24PP0C7X0 464 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM157BP0CG42 384 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 OR5H8P0DN80 308 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 RPL4P36578 427 aaKnown RBP5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 GLP1RP43220 463 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 DAP3P51398 398 aaKnown RBP5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 TMPRSS3P57727 454 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM215Q68D42 235 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 SFXN4Q6P4A7 337 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 FRRS1Q6ZNA5 592 aa5.78□□□□□ -1.48
TM9SF4-202ENST00000398022 MEPCEQ7L2J0 689 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms