RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 ZNF770Q6IQ21 691 aaPredicted RBP13.36□□□□□ -0.27
CHL1-202ENST00000397491 TGIF2LXQ8IUE1 241 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 ZNF738Q8NE65 137 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 CCL4L1Q8NHW4 92 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 S1PR3Q99500 378 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 TMEM191AQ9H0A3 160 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 FRG2CA6NGY1 282 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 C11orf94C9JXX5 98 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 SOCS1O15524 211 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 CDX1P47902 265 aaPredicted RBP13.36□□□□□ -0.27
CHL1-202ENST00000397491 AGFG1P52594 562 aaKnown RBP13.36□□□□□ -0.27
CHL1-202ENST00000397491 PNLIPRP2P54317 469 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 ZXDAP98168 799 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 FAM26DQ5JW98 314 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 H1FXQ92522 213 aaKnown RBP13.36□□□□□ -0.27
CHL1-202ENST00000397491 DDA1Q9BW61 102 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 ZNF355PQ9NSJ1 428 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 ZFC3H1O60293 1989 aaKnown RBP13.36□□□□□ -0.27
CHL1-202ENST00000397491 A0A096LPE4 126 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 A0A1W2PPZ6 126 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 C1QCP02747 245 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 B4GALT1P15291 398 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 TCL1AP56279 114 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 FOXF1Q12946 379 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 COL19A1Q14993 1142 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 MICBQ29980 383 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 LAIR2Q6ISS4 152 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 DEGS2Q6QHC5 323 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 CYB561D1Q8N8Q1 229 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 ANGPTL4Q9BY76 406 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 COMMD5Q9GZQ3 224 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 MANBALQ9NQG1 85 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 DDX60LQ5H9U9 1706 aaKnown RBP13.36□□□□□ -0.27
CHL1-202ENST00000397491 LINC00587B1AMM8 73 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 PRRT4C9JH25 899 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 RAB29O14966 203 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 RER1O15258 196 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 HLA-GP17693 338 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 YRDCQ86U90 279 aaKnown RBP13.36□□□□□ -0.27
CHL1-202ENST00000397491 OR10AC1Q8NH08 325 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 RCC2Q9P258 522 aaKnown RBP13.36□□□□□ -0.27
CHL1-202ENST00000397491 DIRC3C9JPN6 131 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 GCGP01275 180 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 ICAM2P13598 275 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 CLDN15P56746 228 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 PABPC1L2AQ5JQF8 200 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 REC114Q7Z4M0 266 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 ZNF784Q8NCA9 323 aaPredicted RBP13.36□□□□□ -0.27
CHL1-202ENST00000397491 NT5CQ8TCD5 201 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 WDR34Q96EX3 536 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 NAGKQ9UJ70 344 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 CD207Q9UJ71 328 aa13.36□□□□□ -0.27
CHL1-202ENST00000397491 CHST1O43916 411 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 ERHP84090 104 aaKnown RBP13.35□□□□□ -0.27
CHL1-202ENST00000397491 TMEM255AQ5JRV8 349 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 BHLHA9Q7RTU4 235 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 PRSS3P2Q8NHM4 247 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 MRGPRX4Q96LA9 322 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 PECRQ9BY49 303 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 BARX1Q9HBU1 254 aaPredicted RBP13.35□□□□□ -0.27
CHL1-202ENST00000397491 SPAG17Q6Q759 2223 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 OR2J3O76001 311 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 SUCLG1P53597 346 aaKnown RBP13.35□□□□□ -0.27
CHL1-202ENST00000397491 BTNL3Q6UXE8 466 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 LIAT1Q6ZQX7 453 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 SCCPDHQ8NBX0 429 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 OR1L6Q8NGR2 347 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 GALMQ96C23 342 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 MUCL1Q96DR8 90 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 SDHCQ99643 169 aaPredicted RBP13.35□□□□□ -0.27
CHL1-202ENST00000397491 DOK5Q9P104 306 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 MPZL1O95297 269 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 HLA-DQB1P01920 261 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 MMP9P14780 707 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 CTLA4P16410 223 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 MRPL58Q14197 206 aaKnown RBP13.35□□□□□ -0.27
CHL1-202ENST00000397491 DYNLRB1Q9NP97 96 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 MAST2Q6P0Q8 1798 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 OR4C45A6NMZ5 311 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 ADH4P08319 380 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 CCR2P41597 374 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 ACAA2P42765 397 aaKnown RBP13.35□□□□□ -0.27
CHL1-202ENST00000397491 HIST1H2BAQ96A08 127 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 ANXA10Q9UJ72 324 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 OR51B4Q9Y5P0 310 aa13.35□□□□□ -0.27
CHL1-202ENST00000397491 A0A1W2PR80 420 aa13.34□□□□□ -0.27
CHL1-202ENST00000397491 SEMA7AO75326 666 aa13.34□□□□□ -0.27
CHL1-202ENST00000397491 ATP6V0CP27449 155 aa13.34□□□□□ -0.27
CHL1-202ENST00000397491 FAM3BP58499 235 aaPredicted RBP13.34□□□□□ -0.27
CHL1-202ENST00000397491 OR4A47Q6IF82 309 aa13.34□□□□□ -0.27
CHL1-202ENST00000397491 MRGPRGQ86SM5 289 aa13.34□□□□□ -0.27
CHL1-202ENST00000397491 ACY3Q96HD9 319 aa13.34□□□□□ -0.27
CHL1-202ENST00000397491 MOGAT1Q96PD6 335 aa13.34□□□□□ -0.27
CHL1-202ENST00000397491 CDCA3Q99618 268 aaPredicted RBP13.34□□□□□ -0.27
CHL1-202ENST00000397491 SRD5A3Q9H8P0 318 aa13.34□□□□□ -0.27
CHL1-202ENST00000397491 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.34□□□□□ -0.27
CHL1-202ENST00000397491 DDX60Q8IY21 1712 aaKnown RBP13.34□□□□□ -0.27
CHL1-202ENST00000397491 DHRS3O75911 302 aa13.34□□□□□ -0.27
CHL1-202ENST00000397491 CNIH1O95406 144 aa13.34□□□□□ -0.27
CHL1-202ENST00000397491 GLULP15104 373 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms