RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 NXPH1P58417 271 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 SMCO1Q147U7 214 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 SP5Q6BEB4 398 aaPredicted RBP12.1□□□□□ -0.47
NUP98-204ENST00000397004 NTNG2Q96CW9 530 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 ZNF251Q9BRH9 671 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 SPENQ96T58 3664 aaKnown RBP12.1□□□□□ -0.47
NUP98-204ENST00000397004 FXYD4P59646 89 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 SYT13Q7L8C5 426 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 BATF2Q8N1L9 274 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 ZNF561Q8N587 486 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 ADPRHL1Q8NDY3 354 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 TMEM171Q8WVE6 324 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 TP53RKQ96S44 253 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 EIF5A2Q9GZV4 153 aaKnown RBP12.1□□□□□ -0.47
NUP98-204ENST00000397004 TUBA4BQ9H853 241 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 C19orf12Q9NSK7 152 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 HDGFL3Q9Y3E1 203 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 ZNF727A8MUV8 499 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 UMAD1C9J7I0 102 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 RD3LP0DJH9 198 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 EIF5AL1Q6IS14 154 aaKnown RBP12.09□□□□□ -0.47
NUP98-204ENST00000397004 NBEAQ8NFP9 2946 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 OR5L1Q8NGL2 311 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 RTN4IP1Q8WWV3 396 aaPredicted RBP12.09□□□□□ -0.47
NUP98-204ENST00000397004 A0A0U1RQV5 110 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 M0R036 132 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 TXNL1O43396 289 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 FBP1P09467 338 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 SEC11BP0C7V7 166 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 PMELP40967 661 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 P2RY1P47900 373 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 HIST1H3AP68431 136 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 HIST2H3PS2Q5TEC6 136 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 RHBDD2Q6NTF9 364 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 HIST2H3AQ71DI3 136 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 LURAP1LQ8IV03 231 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 SLC39A7Q92504 469 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 CHCHD2Q9Y6H1 151 aaPredicted RBP12.09□□□□□ -0.47
NUP98-204ENST00000397004 TERTO14746 1132 aaKnown RBP12.09□□□□□ -0.47
NUP98-204ENST00000397004 GEMIN2O14893 280 aaKnown RBP12.09□□□□□ -0.47
NUP98-204ENST00000397004 ZNHIT1O43257 154 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 EPHA1P21709 976 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 GRB2P62993 217 aaKnown RBP12.09□□□□□ -0.47
NUP98-204ENST00000397004 PLXDC1Q8IUK5 500 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 CHRDQ9H2X0 955 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 NAA60Q9H7X0 242 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 SLC2A9Q9NRM0 540 aa12.09□□□□□ -0.47
NUP98-204ENST00000397004 FAM212BQ9NTI7 297 aaPredicted RBP12.09□□□□□ -0.47
NUP98-204ENST00000397004 K7N7A8 449 aa12.08□□□□□ -0.47
NUP98-204ENST00000397004 PATE4P0C8F1 98 aa12.08□□□□□ -0.47
NUP98-204ENST00000397004 NKAIN1Q4KMZ8 207 aa12.08□□□□□ -0.47
NUP98-204ENST00000397004 SPSB3Q6PJ21 355 aa12.08□□□□□ -0.47
NUP98-204ENST00000397004 ZIC4Q8N9L1 334 aa12.08□□□□□ -0.47
NUP98-204ENST00000397004 OR10AD1Q8NGE0 317 aa12.08□□□□□ -0.47
NUP98-204ENST00000397004 RASL10BQ96S79 203 aa12.08□□□□□ -0.47
NUP98-204ENST00000397004 METTL7AQ9H8H3 244 aa12.08□□□□□ -0.47
NUP98-204ENST00000397004 SDHAF3Q9NRP4 125 aa12.08□□□□□ -0.47
NUP98-204ENST00000397004 MEMO1Q9Y316 297 aa12.08□□□□□ -0.47
NUP98-204ENST00000397004 H7C1Q1 480 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 CHAF1BQ13112 559 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 ZNF468Q5VIY5 522 aaPredicted RBP12.08□□□□□ -0.48
NUP98-204ENST00000397004 TMEM123Q8N131 208 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 FADS6Q8N9I5 356 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 GALNT14Q96FL9 552 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 RGCCQ9H4X1 137 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 CDRT15L2A8MXV6 281 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 YIF1AO95070 293 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 CHATP28329 748 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 ZNF343Q6P1L6 599 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 LINC00469Q8N7U9 141 aa12.08□□□□□ -0.48
NUP98-204ENST00000397004 TMEM50AO95807 157 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 PLA2G5P39877 138 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 HNRNPKP61978 463 aaKnown RBP eCLIP12.07□□□□□ -0.48
NUP98-204ENST00000397004 SLC35A1P78382 337 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 TMEM182Q6ZP80 229 aaPredicted RBP12.07□□□□□ -0.48
NUP98-204ENST00000397004 TSTD1Q8NFU3 115 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 JSRP1Q96MG2 331 aaPredicted RBP12.07□□□□□ -0.48
NUP98-204ENST00000397004 LMAN1LQ9HAT1 526 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 PROK2Q9HC23 129 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 WNT16Q9UBV4 365 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 E5RGE8 158 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 NDUFS6O75380 124 aaKnown RBP12.07□□□□□ -0.48
NUP98-204ENST00000397004 CA11O75493 328 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 MTCP1P56278 107 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 EIF5AP63241 154 aaKnown RBP12.07□□□□□ -0.48
NUP98-204ENST00000397004 ZNF385CQ66K41 422 aaPredicted RBP12.07□□□□□ -0.48
NUP98-204ENST00000397004 OR4D5Q8NGN0 318 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 NELFAQ9H3P2 528 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 NSG2Q9Y328 171 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 CEP192Q8TEP8 1941 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 FAM230AA0A1W2PPH8 454 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 ZNF14P17017 642 aaPredicted RBP12.07□□□□□ -0.48
NUP98-204ENST00000397004 MSR1P21757 451 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 GLP1RP43220 463 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 LSM6P62312 80 aaKnown RBP12.07□□□□□ -0.48
NUP98-204ENST00000397004 HEPN1Q6WQI6 88 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 SLC35G3Q8N808 338 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 TMEM54Q969K7 222 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 PLEKHA2Q9HB19 425 aa12.07□□□□□ -0.48
NUP98-204ENST00000397004 ZNF407Q9C0G0 2248 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms