RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 FBXL14Q8N1E6 418 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 OR2V1Q8NHB1 315 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 C5orf17Q8NAS9 161 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 ATP5SQ99766 215 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 TMEM167BQ9NRX6 74 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 RAB32Q13637 225 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 INPP5JQ15735 1006 aaPredicted RBP12.5□□□□□ -0.41
COL4A3-202ENST00000396578 RAB24Q969Q5 203 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 LYG1Q8N1E2 194 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 MARVELD1Q9BSK0 173 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 MYOZ1Q9NP98 299 aaPredicted RBP12.5□□□□□ -0.41
COL4A3-202ENST00000396578 AMMECR1Q9Y4X0 333 aaPredicted RBP12.5□□□□□ -0.41
COL4A3-202ENST00000396578 TOGARAM1Q9Y4F4 1720 aa12.5□□□□□ -0.41
COL4A3-202ENST00000396578 MFNGO00587 321 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 TBX19O60806 448 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 NGFP01138 241 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 CAPZBP47756 277 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 OR5AU1Q8NGC0 362 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 HSD17B10Q99714 261 aaKnown RBP12.49□□□□□ -0.41
COL4A3-202ENST00000396578 IL20Q9NYY1 176 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 A0A0A6YYD5 115 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 OR10J1P30954 320 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 PPP2CAP67775 309 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 ZNF77Q15935 545 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 SSX1Q16384 188 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 ETV3LQ6ZN32 361 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 TMEM208Q9BTX3 173 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 DHHO43323 396 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 ETHE1O95571 254 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 CRYBA1P05813 215 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 LPAR6P43657 344 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 FAM74A3Q4VXF1 159 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 PTCRAQ6ISU1 281 aaPredicted RBP12.49□□□□□ -0.41
COL4A3-202ENST00000396578 DHRS13Q6UX07 377 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 RBM14Q96PK6 669 aaKnown RBP12.49□□□□□ -0.41
COL4A3-202ENST00000396578 SARGQ9BW04 601 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 OR2D2Q9H210 308 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 PDFQ9HBH1 243 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 DDX60LQ5H9U9 1706 aaKnown RBP12.49□□□□□ -0.41
COL4A3-202ENST00000396578 LINC01387J3KSC0 135 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 CD99P14209 185 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 HLA-GP17693 338 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 CEACAM16Q2WEN9 425 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 C12orf73Q69YU5 71 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 PRSS54Q6PEW0 395 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 OR1L6Q8NGR2 347 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 SLC7A10Q9NS82 523 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 FBXL17Q9UF56 701 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 HLA-DRB5Q30154 266 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 ZNF141Q15928 474 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 Q3ZCU0 254 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 COX19Q49B96 90 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 CXorf67Q86X51 503 aaPredicted RBP12.49□□□□□ -0.41
COL4A3-202ENST00000396578 RPEQ96AT9 228 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 TP53RKQ96S44 253 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 ASB1Q9Y576 335 aa12.49□□□□□ -0.41
COL4A3-202ENST00000396578 HIST3H3Q16695 136 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-202ENST00000396578 CDRT15L2A8MXV6 281 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 SUCLG1P53597 346 aaKnown RBP12.48□□□□□ -0.41
COL4A3-202ENST00000396578 LIAT1Q6ZQX7 453 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 BPIFA4PQ86YQ2 179 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 PATE1Q8WXA2 126 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 CDC14BO60729 498 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 TSPAN12O95859 305 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 RIGQ13278 110 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 D2HGDHQ8N465 521 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 OR10G8Q8NGN5 311 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 NT5CQ8TCD5 201 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 DOK5Q9P104 306 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 NPTNQ9Y639 398 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 OR10A7Q8NGE5 316 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 KCNE3Q9Y6H6 103 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 C11orf94C9JXX5 98 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 ORM2P19652 201 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 CD40P25942 277 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 G6PCP35575 357 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 FOXF1Q12946 379 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 AWAT1Q58HT5 328 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 ZNF766Q5HY98 468 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 TUSC5Q8IXB3 177 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 ANGPTL4Q9BY76 406 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 PRRX1P54821 245 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 WDR38Q5JTN6 314 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 BTLAQ7Z6A9 289 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 KTI12Q96EK9 354 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-202ENST00000396578 C6orf106Q9H6K1 298 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-202ENST00000396578 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
COL4A3-202ENST00000396578 HPXP02790 462 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 MELTFP08582 738 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 SCGB1A1P11684 91 aa12.48□□□□□ -0.41
COL4A3-202ENST00000396578 RNPS1Q15287 305 aaKnown RBP12.48□□□□□ -0.41
COL4A3-202ENST00000396578 RALGAPA1Q6GYQ0 2036 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 ANKRD36A6QL64 1941 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 ZNF25P17030 456 aaPredicted RBP12.47□□□□□ -0.41
COL4A3-202ENST00000396578 C21orf58P58505 322 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 SPINK9Q5DT21 86 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 PSG11Q9UQ72 335 aa12.47□□□□□ -0.41
COL4A3-202ENST00000396578 IGSF23A1L1A6 192 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms