RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 FAM90A7PA6NKC0 464 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 A6NLC8 198 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 FAM90A22PA8MWA6 464 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 FAM90A12PA8MX19 464 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 FAM90A5PA8MXJ8 464 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 FAM90A23PA8MXZ1 464 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 CTDSPLO15194 276 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 FAM90A15PP0C7V4 464 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 FAM90A13PP0C7W8 464 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 FAM90A14PP0C7W9 464 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 FAM90A24PP0C7X0 464 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 CPT2P23786 658 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 VEGFCP49767 419 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 MADCAM1Q13477 382 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 AGAP6Q5VW22 663 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 FAM58AQ8N1B3 248 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 ZFAND2BQ8WV99 257 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 BORCS5Q969J3 196 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 GAL3ST1Q99999 423 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 CXorf56Q9H5V9 222 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 GCM1Q9NP62 436 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 FAIMQ9NVQ4 179 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 CACNA1DQ01668 2161 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 TRAV18A0A075B6X5 111 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 SOD3P08294 240 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 TMEM50BP56557 158 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 PITPNAQ00169 270 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 PIGYQ3MUY2 71 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 SIGIRRQ6IA17 410 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 DNM1P46Q6ZS02 220 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 MOGAT3Q86VF5 341 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 ZCCHC24Q8N2G6 241 aaKnown RBP12.76□□□□□ -0.37
PTPN20-206ENST00000395722 C15orf40Q8WUR7 153 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 PHF21AQ96BD5 680 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 TRAF4Q9BUZ4 470 aaPredicted RBP12.76□□□□□ -0.37
PTPN20-206ENST00000395722 CCDC32Q9BV29 185 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 ST3GAL6Q9Y274 331 aa12.76□□□□□ -0.37
PTPN20-206ENST00000395722 SRRM5B3KS81 715 aa12.75□□□□□ -0.37
PTPN20-206ENST00000395722 SOCS1O15524 211 aa12.75□□□□□ -0.37
PTPN20-206ENST00000395722 LHBP01229 141 aa12.75□□□□□ -0.37
PTPN20-206ENST00000395722 TNFRSF1AP19438 455 aa12.75□□□□□ -0.37
PTPN20-206ENST00000395722 TLE4Q04727 773 aa12.75□□□□□ -0.37
PTPN20-206ENST00000395722 IL13RA2Q14627 380 aa12.75□□□□□ -0.37
PTPN20-206ENST00000395722 EGLN1Q9GZT9 426 aa12.75□□□□□ -0.37
PTPN20-206ENST00000395722 AUNIPQ9H7T9 357 aa12.75□□□□□ -0.37
PTPN20-206ENST00000395722 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.75□□□□□ -0.37
PTPN20-206ENST00000395722 GEMIN2O14893 280 aaKnown RBP12.74□□□□□ -0.37
PTPN20-206ENST00000395722 GSTZ1O43708 216 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-206ENST00000395722 CCL8P80075 99 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 TAF9Q16594 264 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 ZNF260Q3ZCT1 412 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 PYDC2Q56P42 97 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 PLAC9Q5JTB6 97 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 SP5Q6BEB4 398 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-206ENST00000395722 LINC00596Q86U02 117 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 BATF2Q8N1L9 274 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 LRRC29Q8WV35 223 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 EMG1Q92979 244 aaKnown RBP12.74□□□□□ -0.37
PTPN20-206ENST00000395722 PALMDQ9NP74 551 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 IL36RNQ9UBH0 155 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 MRPS7Q9Y2R9 242 aaKnown RBP12.74□□□□□ -0.37
PTPN20-206ENST00000395722 C3orf80F5H4A9 247 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-206ENST00000395722 MFNGO00587 321 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 MELTFP08582 738 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 PRKACAP17612 351 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 MRPS10P82664 201 aaKnown RBP12.74□□□□□ -0.37
PTPN20-206ENST00000395722 DCTN2Q13561 401 aaKnown RBP12.74□□□□□ -0.37
PTPN20-206ENST00000395722 ZNF181Q2M3W8 571 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 GCSAMQ8N6F7 178 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 SMIM4Q8WVI0 70 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 RAB3CQ96E17 227 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 IFT22Q9H7X7 185 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 RASL12Q9NYN1 266 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 ZNF581Q9P0T4 197 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 HSF4Q9ULV5 492 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 PLEKHA6Q9Y2H5 1048 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 KCNK7Q9Y2U2 307 aa12.74□□□□□ -0.37
PTPN20-206ENST00000395722 A1L4Q6 167 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 NXPH2O95156 264 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 GSTP1P09211 210 aaKnown RBP12.73□□□□□ -0.37
PTPN20-206ENST00000395722 HIST1H1DP16402 221 aaKnown RBP12.73□□□□□ -0.37
PTPN20-206ENST00000395722 EGR1P18146 543 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 CHATP28329 748 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 BLVRBP30043 206 aaPredicted RBP12.73□□□□□ -0.37
PTPN20-206ENST00000395722 ZNF146Q15072 292 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 BAK1Q16611 211 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 MPV17LQ2QL34 196 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 ACP7Q6ZNF0 438 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 RTN4RL2Q86UN3 420 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 FAM90A1Q86YD7 464 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 SNX29P2Q8IUI4 249 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 Q8N402 240 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 SAP30LQ9HAJ7 183 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 DECR2Q9NUI1 292 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 RCC2Q9P258 522 aaKnown RBP12.73□□□□□ -0.37
PTPN20-206ENST00000395722 RNF7Q9UBF6 113 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 TANC2Q9HCD6 1990 aa12.73□□□□□ -0.37
PTPN20-206ENST00000395722 USP9YO00507 2555 aaPredicted RBP12.73□□□□□ -0.37
PTPN20-206ENST00000395722 hCG_1807616A0A1W2PRN6 198 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms