RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 COMMD2Q86X83 199 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 OR4P4Q8NGL7 312 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 OR51E1Q8TCB6 317 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 GIPC3Q8TF64 312 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 TFAP2CQ92754 450 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 TEAD3Q99594 435 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 DGCR6LQ9BY27 220 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 GPR84Q9NQS5 396 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 PIGLQ9Y2B2 252 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 POLDIP2Q9Y2S7 368 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 LSM4Q9Y4Z0 139 aaKnown RBP12.57□□□□□ -0.4
SNCA-205ENST00000394991 DNAH7Q8WXX0 4024 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 PQLC2LA1A4F0 135 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 PSMD9O00233 223 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 FKBP6O75344 327 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 E2F6O75461 281 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 ATP5HO75947 161 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 NRASP01111 189 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 ATP6V1B1P15313 513 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 MPZP25189 248 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 LMO1P25800 156 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 RPL23AP62750 156 aaKnown RBP12.56□□□□□ -0.4
SNCA-205ENST00000394991 CBX1P83916 185 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 DGCR2P98153 550 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 ZNF684Q5T5D7 378 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 BAIAP2L2Q6UXY1 529 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 KRT77Q7Z794 578 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 ZNF573Q86YE8 665 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 OSR2Q8N2R0 312 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 ZNF676Q8N7Q3 588 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 OR51D1Q8NGF3 324 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 AKR1E2Q96JD6 320 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 RBM14Q96PK6 669 aaKnown RBP12.56□□□□□ -0.4
SNCA-205ENST00000394991 FEVQ99581 238 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 NIPSNAP1Q9BPW8 284 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 MCRIP2Q9BUT9 160 aaKnown RBP12.56□□□□□ -0.4
SNCA-205ENST00000394991 CLEC7AQ9BXN2 247 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 TMEM133Q9H2Q1 129 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 GPR173Q9NS66 373 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 ENPP5Q9UJA9 477 aa12.56□□□□□ -0.4
SNCA-205ENST00000394991 TCRBV3S1A0A5B6 114 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 TMEM82A0PJX8 343 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 PRR32B1ATL7 298 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 F8VVB4 439 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 F8VWA3 439 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 MMP23AO75900 390 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 OR2F2O95006 317 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 HOXB6P17509 224 aaKnown RBP12.55□□□□□ -0.4
SNCA-205ENST00000394991 ALOX5APP20292 161 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 HTR1DP28221 377 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 HCCSP53701 268 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 MEF2CQ06413 473 aaPredicted RBP12.55□□□□□ -0.4
SNCA-205ENST00000394991 IL18R1Q13478 541 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 GK3PQ14409 553 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 EDDM3AQ14507 147 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 PLBD1Q6P4A8 553 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 C8orf86Q6ZUL3 223 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 GDPD3Q7L5L3 318 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 TMEM179BQ7Z7N9 219 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 OR8H2Q8N162 312 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 TPRX1Q8N7U7 411 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 CAPSLQ8WWF8 208 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 ITFG2Q969R8 447 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 P2RX4Q99571 388 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 ASCL2Q99929 193 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 PBOV1Q9GZY1 135 aa12.55□□□□□ -0.4
SNCA-205ENST00000394991 GAR1Q9NY12 217 aaKnown RBP12.55□□□□□ -0.4
SNCA-205ENST00000394991 TMEM269A0A1B0GVZ9 245 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 PSMB11A5LHX3 300 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 ACOD1A6NK06 481 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 H3BN98 237 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 DHRS3O75911 302 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 C9orf152Q5JTZ5 239 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 CASC10Q5T4H9 136 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 TMEM42Q69YG0 159 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 UNQ9370/PRO34162Q6UXP9 181 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 ASRGL1Q7L266 308 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 OR2W3Q7Z3T1 314 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 ZNF329Q86UD4 541 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 ANGPTL5Q86XS5 388 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 TEX47Q8TBZ9 253 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 PRR25Q96S07 402 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 DNAJB9Q9UBS3 223 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 HHLA2Q9UM44 414 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 LINC00312Q9Y6C7 94 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 DNAH1Q9P2D7 4330 aa12.54□□□□□ -0.4
SNCA-205ENST00000394991 hADV38S2A0JD32 116 aa12.53□□□□□ -0.4
SNCA-205ENST00000394991 H3BUI4 141 aa12.53□□□□□ -0.4
SNCA-205ENST00000394991 TTRP02766 147 aa12.53□□□□□ -0.4
SNCA-205ENST00000394991 PRKACGP22612 351 aa12.53□□□□□ -0.4
SNCA-205ENST00000394991 MFGE8Q08431 387 aaPredicted RBP12.53□□□□□ -0.4
SNCA-205ENST00000394991 CLVS2Q5SYC1 327 aa12.53□□□□□ -0.4
SNCA-205ENST00000394991 C1orf146Q5VVC0 180 aa12.53□□□□□ -0.4
SNCA-205ENST00000394991 HS3ST5Q8IZT8 346 aa12.53□□□□□ -0.4
SNCA-205ENST00000394991 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
SNCA-205ENST00000394991 DUX3Q96PT4 197 aa12.53□□□□□ -0.4
SNCA-205ENST00000394991 DPM3Q9P2X0 92 aa12.53□□□□□ -0.4
SNCA-205ENST00000394991 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
SNCA-205ENST00000394991 ARRDC5A6NEK1 342 aa12.52□□□□□ -0.41
SNCA-205ENST00000394991 PRR23D1E9PI22 279 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms