RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 NOX4Q9NPH5 578 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 CDC42EP3Q9UKI2 254 aa16.53■□□□□ 0.24
SNCA-203ENST00000394986 IGHV2-70DA0A0C4DH43 119 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 GABRPO00591 440 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 SIGLEC5O15389 551 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 PCMT1P22061 227 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 NPY4RP50391 375 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 SNU13P55769 128 aaKnown RBP16.52■□□□□ 0.23
SNCA-203ENST00000394986 RPS25P62851 125 aaKnown RBP16.52■□□□□ 0.23
SNCA-203ENST00000394986 IL13RA1P78552 427 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 MLLT11Q13015 90 aaPredicted RBP16.52■□□□□ 0.23
SNCA-203ENST00000394986 CHRFAM7AQ494W8 412 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 ACSM3Q53FZ2 586 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 FAM27D1Q5T7N8 215 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 DDI2Q5TDH0 399 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 ZNF367Q7RTV3 350 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 ZNRF1Q8ND25 227 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 NUDT16L1Q9BRJ7 211 aaKnown RBP16.52■□□□□ 0.23
SNCA-203ENST00000394986 YTHDF1Q9BYJ9 559 aaKnown RBP16.52■□□□□ 0.23
SNCA-203ENST00000394986 MAB21L2Q9Y586 359 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 INSIG2Q9Y5U4 225 aa16.52■□□□□ 0.23
SNCA-203ENST00000394986 NAV3Q8IVL0 2385 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 PPIAL4CA0A0B4J2A2 164 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 MAGEB3O15480 346 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 NDUFB3O43676 98 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 CYB5AP00167 134 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 TMEM225BP0DP42 221 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 ADRA2CP18825 462 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 FSTP19883 344 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 BDKRB2P30411 391 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 PRDX2P32119 198 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 TGFBR2P37173 567 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 TPBGQ13641 420 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 BTN2A1Q7KYR7 527 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 C1QL2Q7Z5L3 287 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 SPARTQ8N0X7 666 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 MS4A15Q8N5U1 240 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 TMEM185AQ8NFB2 350 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 RAB40AQ8WXH6 277 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 GPER1Q99527 375 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 FAM192AQ9GZU8 254 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 DNTTIP1Q9H147 329 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 C7orf69Q9H7B7 122 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 ELL3Q9HB65 397 aaPredicted RBP16.51■□□□□ 0.23
SNCA-203ENST00000394986 ISYNA1Q9NPH2 558 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 TMEM138Q9NPI0 162 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 CKLFQ9UBR5 152 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 OPN4Q9UHM6 478 aa16.51■□□□□ 0.23
SNCA-203ENST00000394986 KNG1P01042 644 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 MAS1P04201 325 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 SFTPBP07988 381 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 CPEP16870 476 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 PRKACAP17612 351 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 HNF1AP20823 631 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 OR3A4PP47883 348 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 LRRC10Q5BKY1 277 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 PHC2Q8IXK0 858 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 TNFAIP8L1Q8WVP5 186 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 SDSLQ96GA7 329 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 SLC25A10Q9UBX3 287 aaPredicted RBP16.5■□□□□ 0.23
SNCA-203ENST00000394986 LPAR3Q9UBY5 353 aa16.5■□□□□ 0.23
SNCA-203ENST00000394986 J3QLI3 93 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 MRPS14O60783 128 aaKnown RBP16.49■□□□□ 0.23
SNCA-203ENST00000394986 GPX5O75715 221 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 KDM4BO94953 1096 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 GATA3P23771 443 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 MAPK3P27361 379 aaPredicted RBP16.49■□□□□ 0.23
SNCA-203ENST00000394986 DUSP1P28562 367 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 GP2P55259 537 aaKnown RBP16.49■□□□□ 0.23
SNCA-203ENST00000394986 GPR50Q13585 617 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 ARMCX4Q5H9R4 360 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 UNQ9370/PRO34162Q6UXP9 181 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 FAM58AQ8N1B3 248 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 SVOPQ8N4V2 548 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 H1FXQ92522 213 aaKnown RBP16.49■□□□□ 0.23
SNCA-203ENST00000394986 MED30Q96HR3 178 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 PPIL3Q9H2H8 161 aaKnown RBP16.49■□□□□ 0.23
SNCA-203ENST00000394986 LRRC42Q9Y546 428 aa16.49■□□□□ 0.23
SNCA-203ENST00000394986 KIR2DS1A0A191URI9 304 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 SC5DO75845 299 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 ALDOBP05062 364 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 NDUFB7P17568 137 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 ZNF93P35789 620 aaPredicted RBP16.48■□□□□ 0.23
SNCA-203ENST00000394986 SRP14P37108 136 aaKnown RBP16.48■□□□□ 0.23
SNCA-203ENST00000394986 CAPZA1P52907 286 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 COL10A1Q03692 680 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 SSX1Q16384 188 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 CD276Q5ZPR3 534 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 ZNF773Q6PK81 442 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 BTNL3Q6UXE8 466 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 TMEM91Q6ZNR0 172 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 CEACAM19Q7Z692 300 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 Q8IYB0 196 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 OR10K1Q8NGX5 313 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 FOXJ3Q9UPW0 622 aa16.48■□□□□ 0.23
SNCA-203ENST00000394986 SF3B6Q9Y3B4 125 aaKnown RBP16.48■□□□□ 0.23
SNCA-203ENST00000394986 ENSAO43768 121 aaKnown RBP16.47■□□□□ 0.23
SNCA-203ENST00000394986 SRD5A1P18405 259 aa16.47■□□□□ 0.23
SNCA-203ENST00000394986 PAX8Q06710 450 aa16.47■□□□□ 0.23
SNCA-203ENST00000394986 KCTD21Q4G0X4 260 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms