RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 SP9P0CG40 484 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 TMEM225BP0DP42 221 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 RBM11P57052 281 aaKnown RBP13.25□□□□□ -0.29
CPSF7-202ENST00000394888 SCRN3Q0VDG4 424 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 LHFPL2Q6ZUX7 228 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 LRFN1Q9P244 771 aa13.25□□□□□ -0.29
CPSF7-202ENST00000394888 GPR179Q6PRD1 2367 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 APOC1P02654 83 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 LCATP04180 440 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 RCC1P18754 421 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-202ENST00000394888 MAGEA5P43359 124 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 RBP2P50120 134 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 PLEKHN1Q494U1 663 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-202ENST00000394888 THAP6Q8TBB0 222 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 MSI2Q96DH6 328 aaKnown RBP13.24□□□□□ -0.29
CPSF7-202ENST00000394888 SCRT1Q9BWW7 348 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 TTTY12Q9BZ98 90 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 METTL9Q9H1A3 318 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 ZNF701Q9NV72 531 aaPredicted RBP13.24□□□□□ -0.29
CPSF7-202ENST00000394888 PLEKHJ1Q9NW61 149 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 SPEF1Q9Y4P9 236 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 LIPGQ9Y5X9 500 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 FAM221AA4D161 298 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 FAM74A7A6NL05 159 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 HERPUD1Q15011 391 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 FAM74A3Q4VXF1 159 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 TUSC5Q8IXB3 177 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 FBXL14Q8N1E6 418 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 BOLLQ8N9W6 283 aaKnown RBP13.24□□□□□ -0.29
CPSF7-202ENST00000394888 MDS2Q8NDY4 140 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 CDK2AP1O14519 115 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 CCL2P13500 99 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 NKAPLQ5M9Q1 402 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 USB1Q9BQ65 265 aaKnown RBP13.24□□□□□ -0.29
CPSF7-202ENST00000394888 SLC6A15Q9H2J7 730 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 BCO1Q9HAY6 547 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 COMMD9Q9P000 198 aa13.24□□□□□ -0.29
CPSF7-202ENST00000394888 PTPRBP23467 1997 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 ABCD4O14678 606 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 SERPINA5P05154 406 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 ODF3L1Q8IXM7 274 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 LRTM2Q8N967 370 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 WNT2BQ93097 391 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 IL17BQ9UHF5 180 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 DCHS1Q96JQ0 3298 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 DEDDO75618 318 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 OR5H8P0DN80 308 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 FAM189A2Q15884 450 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 ELP2Q6IA86 826 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 GALNT14Q96FL9 552 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 TRAPPC6AO75865 159 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 IFNA2P01563 188 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 ARHGDIBP52566 201 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 TAGLNQ01995 201 aaKnown RBP13.23□□□□□ -0.29
CPSF7-202ENST00000394888 CHRFAM7AQ494W8 412 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 MYPOPQ86VE0 399 aaPredicted RBP13.23□□□□□ -0.29
CPSF7-202ENST00000394888 OSR2Q8N2R0 312 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 OR11L1Q8NGX0 322 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 SMIM8Q96KF7 97 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 CNTNAP3BQ96NU0 1288 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 ZPBPQ9BS86 351 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 CNTNAP3Q9BZ76 1288 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 RCC2Q9P258 522 aaKnown RBP13.23□□□□□ -0.29
CPSF7-202ENST00000394888 ZNF391Q9UJN7 358 aa13.23□□□□□ -0.29
CPSF7-202ENST00000394888 DNAJC13O75165 2243 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 KNG1P01042 644 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 ARF1P84077 181 aaKnown RBP13.22□□□□□ -0.29
CPSF7-202ENST00000394888 RNFT1Q5M7Z0 435 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 BAP18Q8IXM2 172 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 BATF2Q8N1L9 274 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 GLYATL2Q8WU03 294 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 ARV1Q9H2C2 271 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 RGCCQ9H4X1 137 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 PLA2G3Q9NZ20 509 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 ATPIF1Q9UII2 106 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 ATMQ13315 3056 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 IGKV1-6A0A0C4DH72 117 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 F5H0A9 414 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-202ENST00000394888 HOXB5P09067 269 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 GUCA1AP43080 201 aaPredicted RBP13.22□□□□□ -0.29
CPSF7-202ENST00000394888 IGFBP7Q16270 282 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 C3AR1Q16581 482 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 GGNBP1Q5YKI7 109 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 TMEM251Q8N6I4 163 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 SPERTQ8NA61 448 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 LYPD6BQ8NI32 183 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 TMED6Q8WW62 240 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 FAM173AQ9BQD7 235 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 EDARQ9UNE0 448 aa13.22□□□□□ -0.29
CPSF7-202ENST00000394888 NGFP01138 241 aa13.21□□□□□ -0.29
CPSF7-202ENST00000394888 PRKACBP22694 351 aa13.21□□□□□ -0.29
CPSF7-202ENST00000394888 FUT6P51993 359 aa13.21□□□□□ -0.29
CPSF7-202ENST00000394888 CNN3Q15417 329 aaKnown RBP13.21□□□□□ -0.29
CPSF7-202ENST00000394888 NUFIP2Q7Z417 695 aaKnown RBP13.21□□□□□ -0.29
CPSF7-202ENST00000394888 RSRP1Q9BUV0 290 aa13.21□□□□□ -0.29
CPSF7-202ENST00000394888 WFDC1Q9HC57 220 aa13.21□□□□□ -0.29
CPSF7-202ENST00000394888 GP6Q9HCN6 339 aa13.21□□□□□ -0.29
CPSF7-202ENST00000394888 C9JQL5 133 aa13.21□□□□□ -0.29
CPSF7-202ENST00000394888 WISP2O76076 250 aa13.21□□□□□ -0.29
CPSF7-202ENST00000394888 NAPSAO96009 420 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms