RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 REEP6Q96HR9 211 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 TRIOBPQ9H2D6 2365 aa8.76□□□□□ -1.01
UBE2D3-208ENST00000394803 MYO9BQ13459 2157 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 OR5H15A6NDH6 313 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A10PA6NDY2 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A18PA6NE21 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A16PA6NEW6 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A20PA6NIJ5 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A8PA6NJQ4 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A7PA6NKC0 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A22PA8MWA6 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A12PA8MX19 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A5PA8MXJ8 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A23PA8MXZ1 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 ZNF814B7Z6K7 855 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 BCAT2O15382 392 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 NME2P1O60361 137 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 DKK1O94907 266 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 ACAA1P09110 424 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A15PP0C7V4 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A13PP0C7W8 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A14PP0C7W9 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM90A24PP0C7X0 464 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FUT6P51993 359 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 PCBD1P61457 104 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 CHAF1BQ13112 559 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 EXT1Q16394 746 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 SRSF7Q16629 238 aaKnown RBP eCLIP8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 KRBOX4Q5JUW0 171 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 DPPA3Q6W0C5 159 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 SUMF2Q8NBJ7 301 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 OR14L1PQ8NHC6 308 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 ERGIC1Q969X5 290 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 GNPNAT1Q96EK6 184 aaPredicted RBP8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 RSRP1Q9BUV0 290 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 PLSCR2Q9NRY7 297 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 GPR173Q9NS66 373 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 DKKL1Q9UK85 242 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 FER1L5A0AVI2 2057 aa8.75□□□□□ -1.01
UBE2D3-208ENST00000394803 IGKV1D-8A0A087WSZ0 117 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 FAM230AA0A1W2PPH8 454 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 AP4M1O00189 453 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 PDCD6O75340 191 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 PITX3O75364 302 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 DIRAS3O95661 229 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 OPN1LWP04000 364 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 FABP1P07148 127 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 TCN2P20062 427 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 RGS19P49795 217 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 SULT1A1P50225 295 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 TAF9Q16594 264 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 SLC22A25Q6T423 547 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 WDR5BQ86VZ2 330 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 PPP1R3BQ86XI6 285 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 C20orf196Q8IYI0 205 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 SLC25A45Q8N413 288 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 ZNF565Q8N9K5 539 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 CD300LFQ8TDQ1 290 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 DNASE2BQ8WZ79 361 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 SGK3Q96BR1 496 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 ZNF775Q96BV0 537 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 SPSB2Q99619 263 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 FAAP24Q9BTP7 215 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 SEBOXQ9HB31 216 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 ZMAT5Q9UDW3 170 aaKnown RBP8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 FOXD3Q9UJU5 478 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 CHCHD2Q9Y6H1 151 aaPredicted RBP8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 C9JQL5 133 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 NRASP01111 189 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 HBE1P02100 147 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 CRYGSP22914 178 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 S100GP29377 79 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 EIF2S3P41091 472 aaKnown RBP8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 STARD6P59095 220 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 VAMP2P63027 116 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 BAXQ07812 192 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 SOHLH1Q5JUK2 328 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 RAET1LQ5VY80 246 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 OR2C3Q8N628 320 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 OR1F12Q8NHA8 337 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 CPT1CQ8TCG5 803 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 MSI2Q96DH6 328 aaKnown RBP8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 OR51M1Q9H341 326 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 TMPRSS5Q9H3S3 457 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 PLEKHF2Q9H8W4 249 aa8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 RCL1Q9Y2P8 373 aaKnown RBP8.74□□□□□ -1.01
UBE2D3-208ENST00000394803 SEC16AO15027 2179 aa8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 A0A087WWC5 75 aa8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 OR6C6A6NF89 314 aa8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 E9PLN8 166 aa8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 TERTO14746 1132 aaKnown RBP8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 PHF1O43189 567 aaPredicted RBP8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 XRCC2O43543 280 aa8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 RAMP1O60894 148 aa8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 LMO1P25800 156 aa8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 NKX2-1P43699 371 aaPredicted RBP8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 FXYD4P59646 89 aa8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 RND3P61587 244 aa8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 RAC1P63000 192 aa8.73□□□□□ -1.01
UBE2D3-208ENST00000394803 EWSR1Q01844 656 aaKnown RBP eCLIP8.73□□□□□ -1.015e-7■■■■■ 34.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms