RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 BCL3P20749 454 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 SERPINF1P36955 418 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 ERVS71-1P61550 626 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 PNLIPRP3Q17RR3 467 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 TMUB2Q71RG4 321 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 MED12LQ86YW9 2145 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 CDH26Q8IXH8 852 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 C17orf78Q8N4C9 275 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 SLC30A7Q8NEW0 376 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 OR5AP2Q8NGF4 316 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 CPNE2Q96FN4 548 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-203ENST00000394269 ALX4Q9H161 411 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-203ENST00000394269 RGCCQ9H4X1 137 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 FZR1Q9UM11 496 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 ZNF724A8MTY0 619 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 MPTX1A8MV57 137 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 OR5H8P0DN80 308 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 ZBTB25P24278 435 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 ARR3P36575 388 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 MECP2P51608 486 aaKnown RBP9.6□□□□□ -0.87
TCOF1-203ENST00000394269 SP6Q3SY56 376 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 RFPL4BQ6ZWI9 263 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 GLRX5Q86SX6 157 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 EMG1Q92979 244 aaKnown RBP9.6□□□□□ -0.87
TCOF1-203ENST00000394269 C10orf35Q96D05 121 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 OCSTAMPQ9BR26 566 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 UBQLN2Q9UHD9 624 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 MAB21L2Q9Y586 359 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 COL27A1Q8IZC6 1860 aaPredicted RBP9.6□□□□□ -0.87
TCOF1-203ENST00000394269 CD300LBA8K4G0 201 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 MPGP29372 298 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 S100A11P31949 105 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 PHLDA2Q53GA4 152 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 SLC22A25Q6T423 547 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 HOGA1Q86XE5 327 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 RDH5Q92781 318 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 LINC00470Q9BZP3 86 aa9.6□□□□□ -0.87
TCOF1-203ENST00000394269 TRAV17A0A0B4J275 112 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 OR6C65A6NJZ3 312 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 SYNGR1O43759 233 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 HOXD11P31277 338 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-203ENST00000394269 TAS2R46P59540 309 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 GTF3C1Q12789 2109 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 IKZF1Q13422 519 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 CLEC18BQ6UXF7 455 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 MYPOPQ86VE0 399 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-203ENST00000394269 ZDHHC23Q8IYP9 409 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 REPIN1Q9BWE0 567 aaKnown RBP9.59□□□□□ -0.87
TCOF1-203ENST00000394269 ABCA4P78363 2273 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 ANKRD30BLA7E2S9 258 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 BET1O15155 118 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 TMEM128Q5BJH2 165 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 VWA1Q6PCB0 445 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 SEZ6L2Q6UXD5 910 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 CXorf67Q86X51 503 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-203ENST00000394269 PRR18Q8N4B5 295 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 POM121L2Q96KW2 1035 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 PRDM14Q9GZV8 571 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 C14orf166Q9Y224 244 aaKnown RBP9.59□□□□□ -0.87
TCOF1-203ENST00000394269 INTS1Q8N201 2190 aaKnown RBP9.59□□□□□ -0.87
TCOF1-203ENST00000394269 KIAA2026Q5HYC2 2103 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 MEX3AA1L020 520 aaKnown RBP9.59□□□□□ -0.87
TCOF1-203ENST00000394269 FIGNL2A6NMB9 653 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 RP2O75695 350 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 WNT5AP41221 380 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 CBX5P45973 191 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 P2RX3P56373 397 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 S100A10P60903 97 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 FOXF2Q12947 444 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 OR8B8Q15620 311 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 ARRDC1Q8N5I2 433 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 ZDHHC22Q8N966 263 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 OR5M8Q8NGP6 311 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 OR1K1Q8NGR3 316 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 UBALD1Q8TB05 177 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 WBP1Q96G27 269 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 OR2J1Q9GZK6 312 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 WDR13Q9H1Z4 485 aa9.59□□□□□ -0.87
TCOF1-203ENST00000394269 ZNF107Q9UII5 783 aaPredicted RBP9.59□□□□□ -0.87
TCOF1-203ENST00000394269 PKD1L2Q7Z442 2459 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 TRAV39A0A0B4J263 110 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 TRAPPC2LH3BP13 241 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 C4BPBP20851 252 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 CD82P27701 267 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 HOXC12P31275 282 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 TGFBR3Q03167 851 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 RELL2Q8NC24 303 aaPredicted RBP9.58□□□□□ -0.88
TCOF1-203ENST00000394269 THAP6Q8TBB0 222 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 GPHA2Q96T91 129 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 ZDHHC11Q9H8X9 412 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 CDH20Q9HBT6 801 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 SLC2A8Q9NY64 477 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 ANXA10Q9UJ72 324 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 GPR132Q9UNW8 380 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 KALRNO60229 2985 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 PRKACAP17612 351 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 TBPP20226 339 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 FCGR2CP31995 323 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 ABCA11PQ4W5N1 156 aa9.58□□□□□ -0.88
TCOF1-203ENST00000394269 AADACL3Q5VUY0 350 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms