RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ZNF714Q96N38 554 aa14.09□□□□□ -0.15
SNRPA1-202ENST00000394082 NECAP2Q9NVZ3 263 aa14.09□□□□□ -0.15
SNRPA1-202ENST00000394082 MRM2Q9UI43 246 aaKnown RBP14.09□□□□□ -0.15
SNRPA1-202ENST00000394082 GTF2A1LQ9UNN4 478 aa14.09□□□□□ -0.15
SNRPA1-202ENST00000394082 hADV38S2A0JD32 116 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 ADARB2-AS1A8MUL3 147 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 FAM90A22PA8MWA6 464 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 CD28P10747 220 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 PIPP12273 146 aaPredicted RBP14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 RAB13P51153 203 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 DAPP51397 102 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 FUT6P51993 359 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 OR12D2P58182 307 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 HABP2Q14520 560 aaPredicted RBP14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 DNAL1Q4LDG9 190 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 SLX4IPQ5VYV7 408 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 ZBTB49Q6ZSB9 765 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 SPATA24Q86W54 205 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 ANGPTL5Q86XS5 388 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 GID4Q8IVV7 300 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 Q8IYB0 196 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 ASCC1Q8N9N2 400 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 WFDC9Q8NEX5 89 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 TMEM163Q8TC26 289 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 UTP4Q969X6 686 aaKnown RBP14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 TTTY10Q9BZA0 68 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 MMP28Q9H239 520 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 MTCH1Q9NZJ7 389 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 LINC00312Q9Y6C7 94 aa14.08□□□□□ -0.16
SNRPA1-202ENST00000394082 ZAR1LA6NP61 321 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 GATBO75879 557 aaKnown RBP14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 EDDM3BP56851 147 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 LOXL3P58215 753 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 NSUN5P1Q3KNT7 163 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 OXLD1Q5BKU9 147 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 C12orf73Q69YU5 71 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 TCF23Q7RTU1 214 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 C16orf82Q7Z2V1 217 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 ENTHD1Q8IYW4 607 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 R3HDM4Q96D70 268 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 CITED2Q99967 270 aaPredicted RBP14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 CHST5Q9GZS9 411 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 PLEKHA1Q9HB21 404 aa14.07□□□□□ -0.16
SNRPA1-202ENST00000394082 PEX14O75381 377 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 SULT1C4O75897 302 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 DNAJC8O75937 253 aaPredicted RBP14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 KRT8P05787 483 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 ACTA2P62736 377 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 ACTG2P63267 376 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 ACTC1P68032 377 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 ACTA1P68133 377 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 UBE2V2Q15819 145 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 HIST2H2BDQ6DRA6 164 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 CATSPERDQ86XM0 798 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 TMEM219Q86XT9 240 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 TCEANCQ8N8B7 351 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 DNAAF1Q8NEP3 725 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 WARS2Q9UGM6 360 aaKnown RBP14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 ENOPH1Q9UHY7 261 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 POMPQ9Y244 141 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 SESN1Q9Y6P5 492 aa14.06□□□□□ -0.16
SNRPA1-202ENST00000394082 IGKV1-27A0A075B6S5 117 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 IGHV2-26A0A0B4J1V2 119 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 FAM230AA0A1W2PPH8 454 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 A6NIN4 97 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 F8VVB4 439 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 F8VWA3 439 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 F2RL2O00254 374 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 MAGEB4O15481 346 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 GYG2O15488 501 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 SYT7O43581 403 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 ALX3O95076 343 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 SERPINA3P01011 423 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 OR2T7P0C7T2 308 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 PEX2P28328 305 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 ERP29P30040 261 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 CD83Q01151 205 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 DYNC1I2Q13409 638 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 IL18R1Q13478 541 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 ZNF146Q15072 292 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 PLA1AQ53H76 456 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 PLEKHG7Q6ZR37 379 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 BCDIN3DQ7Z5W3 292 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 TRMT10AQ8TBZ6 339 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 MRAPQ8TCY5 172 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 PP6455Q8WZ26 134 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 OCSTAMPQ9BR26 566 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 CADM1Q9BY67 442 aaKnown RBP14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 TMEM133Q9H2Q1 129 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 KRT84Q9NSB2 600 aa14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.05□□□□□ -0.16
SNRPA1-202ENST00000394082 TMEM82A0PJX8 343 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 METTL15A6NJ78 407 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 PRB2P02812 416 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 VDAC2P45880 294 aaPredicted RBP14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 BLCAPP62952 87 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 KDM4DQ6B0I6 523 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 SLC25A26Q70HW3 274 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 EGFL6Q8IUX8 553 aa14.04□□□□□ -0.16
SNRPA1-202ENST00000394082 LYG1Q8N1E2 194 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms