RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 NDE1Q9NXR1 346 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 DNAJB9Q9UBS3 223 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 LINC00312Q9Y6C7 94 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 SACSQ9NZJ4 4579 aa12.26□□□□□ -0.45
CHMP3-202ENST00000393773 A0A1B0GTI1 187 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 E9PQ18 207 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 ZNF254O75437 659 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 DNAJC8O75937 253 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-202ENST00000393773 LPLP06858 475 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 EDDM3AQ14507 147 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 FAM98BQ52LJ0 330 aaKnown RBP12.25□□□□□ -0.45
CHMP3-202ENST00000393773 CENPVQ7Z7K6 275 aaPredicted RBP12.25□□□□□ -0.45
CHMP3-202ENST00000393773 ANGPTL5Q86XS5 388 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 ZNF676Q8N7Q3 588 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 TPRX1Q8N7U7 411 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 OR4X2Q8NGF9 303 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 OR14K1Q8NGZ2 314 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 CLEC7AQ9BXN2 247 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 FAM107BQ9H098 131 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 TMEM133Q9H2Q1 129 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 MTCH1Q9NZJ7 389 aa12.25□□□□□ -0.45
CHMP3-202ENST00000393773 HUWE1Q7Z6Z7 4374 aaKnown RBP12.25□□□□□ -0.45
CHMP3-202ENST00000393773 A6NIN4 97 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 DHRS7CA6NNS2 312 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 MMP23AO75900 390 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 AMY1AP04745 511 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 AMY2AP04746 511 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 HMGN1P05114 100 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 CHRM2P08172 466 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 CD24P25063 80 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 RIDAP52758 137 aaKnown RBP12.24□□□□□ -0.45
CHMP3-202ENST00000393773 ESRRGP62508 458 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 IL18R1Q13478 541 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 ABCA11PQ4W5N1 156 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 KHDC1LQ5JSQ8 128 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 DHFR2Q86XF0 187 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 ELMOD2Q8IZ81 293 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 TRMT10AQ8TBZ6 339 aaKnown RBP12.24□□□□□ -0.45
CHMP3-202ENST00000393773 ASB17Q8WXJ9 295 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 CEP19Q96LK0 163 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 SLC25A33Q9BSK2 321 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 SLC25A19Q9HC21 320 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-202ENST00000393773 IL36RNQ9UBH0 155 aa12.24□□□□□ -0.45
CHMP3-202ENST00000393773 IGKV1-27A0A075B6S5 117 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 hADV38S2A0JD32 116 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 SH2D7A6NKC9 451 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-202ENST00000393773 LOC110117498-PIK3R3F6TDL0 507 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 E2F6O75461 281 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 OR2F2O95006 317 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 CLIC3O95833 236 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 IGHA1P01876 353 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 RAP2AP10114 183 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 OSMP13725 252 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 CCL1P22362 96 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 HTR1DP28221 377 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 MS4A2Q01362 244 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 BCL2L15Q5TBC7 163 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 BAIAP2L2Q6UXY1 529 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 PLEKHG7Q6ZR37 379 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 MRPL41Q8IXM3 137 aaKnown RBP12.23□□□□□ -0.45
CHMP3-202ENST00000393773 OR52N4Q8NGI2 321 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 SLAMF9Q96A28 289 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 AKR1E2Q96JD6 320 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 SNX22Q96L94 193 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 CADM1Q9BY67 442 aaKnown RBP12.23□□□□□ -0.45
CHMP3-202ENST00000393773 GPR61Q9BZJ8 451 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 CHST6Q9GZX3 395 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 IKZF2Q9UKS7 526 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.23□□□□□ -0.45
CHMP3-202ENST00000393773 GTF2A1LQ9UNN4 478 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 TMEM14AQ9Y6G1 99 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 R4GMQ9 66 aa12.23□□□□□ -0.45
CHMP3-202ENST00000393773 EPPK1P58107 5090 aaKnown RBP12.23□□□□□ -0.45
CHMP3-202ENST00000393773 PSPNO60542 156 aa12.22□□□□□ -0.45
CHMP3-202ENST00000393773 CST1P01037 141 aa12.22□□□□□ -0.45
CHMP3-202ENST00000393773 HSP90B2PQ58FF3 399 aa12.22□□□□□ -0.45
CHMP3-202ENST00000393773 TMEM236Q5W0B7 351 aa12.22□□□□□ -0.45
CHMP3-202ENST00000393773 ZBTB49Q6ZSB9 765 aa12.22□□□□□ -0.45
CHMP3-202ENST00000393773 HS3ST5Q8IZT8 346 aa12.22□□□□□ -0.45
CHMP3-202ENST00000393773 OSR2Q8N2R0 312 aa12.22□□□□□ -0.45
CHMP3-202ENST00000393773 DPF1Q92782 380 aa12.22□□□□□ -0.45
CHMP3-202ENST00000393773 RBM14Q96PK6 669 aaKnown RBP12.22□□□□□ -0.45
CHMP3-202ENST00000393773 CNN2Q99439 309 aaKnown RBP12.22□□□□□ -0.45
CHMP3-202ENST00000393773 MED4Q9NPJ6 270 aa12.22□□□□□ -0.45
CHMP3-202ENST00000393773 OR52A1Q9UKL2 312 aa12.22□□□□□ -0.45
CHMP3-202ENST00000393773 LYSTQ99698 3801 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 FAM230AA0A1W2PPH8 454 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 MAGEB4O15481 346 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-202ENST00000393773 HAND1O96004 215 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 IGLV1-47P01700 117 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 BDH1Q02338 343 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 ZNF91Q05481 1191 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 TRIM25Q14258 630 aaKnown RBP12.21□□□□□ -0.45
CHMP3-202ENST00000393773 GRK1Q15835 563 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 PRAMEF5Q5TYX0 476 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 ZNF322Q6U7Q0 402 aaPredicted RBP12.21□□□□□ -0.45
CHMP3-202ENST00000393773 ADGRG5Q8IZF4 528 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 BCAS4Q8TDM0 211 aa12.21□□□□□ -0.45
CHMP3-202ENST00000393773 APOL4Q9BPW4 351 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms