RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 OR10S1Q8NGN2 331 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 MUCL1Q96DR8 90 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 HS3ST3B1Q9Y662 390 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 TOX3O15405 576 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 CRTAPO75718 401 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 CHATP28329 748 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 HSD11B1P28845 292 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 CCL20P78556 96 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 USF2Q15853 346 aaPredicted RBP15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 SP6Q3SY56 376 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 VAX1Q5SQQ9 334 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 MRPS28Q9Y2Q9 187 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 TMEM14DPA8MWL7 114 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 TERTO14746 1132 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 ZFAND5O76080 213 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 GAPDHP04406 335 aaKnown RBP15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 QDPRP09417 244 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 CASP6P55212 293 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 SLAMF6Q96DU3 332 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 YPEL4Q96NS1 127 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 NELFAQ9H3P2 528 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 B3GALT5Q9Y2C3 310 aa15.48■□□□□ 0.07
SQSTM1-202ENST00000389805 H0YL77 283 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 PPP1R2P9O14990 202 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 CYB5BO43169 146 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 TTRP02766 147 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 TAS2R60P59551 318 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 GGNBP1Q5YKI7 109 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 DNM1P34Q6PK57 102 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 OR5L2Q8NGL0 311 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 REEP6Q96HR9 211 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 RASL10BQ96S79 203 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 PRDM6Q9NQX0 595 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 ZDBF2Q9HCK1 2354 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 ARGFXA6NJG6 315 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 ERVFRD-1P60508 538 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 PEG10Q86TG7 708 aaKnown RBP15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 OR14K1Q8NGZ2 314 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 OR51E1Q8TCB6 317 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 RAB39BQ96DA2 213 aa15.47■□□□□ 0.07
SQSTM1-202ENST00000389805 ISG15P05161 165 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 RAB1AP62820 205 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 NHLH2Q02577 135 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 HAGHQ16775 308 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 RNF133Q8WVZ7 376 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 LURAP1Q96LR2 239 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 GPER1Q99527 375 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 S100A13Q99584 98 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 ABHD14AQ9BUJ0 271 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 PBDC1Q9BVG4 233 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 TMEM59Q9BXS4 323 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 DEFB126Q9BYW3 111 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 ALKBH4Q9NXW9 302 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 PISDQ9UG56 409 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 OSGIN2Q9Y236 505 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 PATE3B3GLJ2 98 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 PDGFBP01127 241 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 KDF1Q8NAX2 398 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 NPRL2Q8WTW4 380 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 POM121Q96HA1 1249 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 SCGB3A2Q96PL1 93 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 DUSP23Q9BVJ7 150 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 CRLF2Q9HC73 371 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 ZNF701Q9NV72 531 aaPredicted RBP15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 C1orf123Q9NWV4 160 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 FAM206AQ9NX38 181 aa15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 C14orf166Q9Y224 244 aaKnown RBP15.46■□□□□ 0.07
SQSTM1-202ENST00000389805 CDRT15L2A8MXV6 281 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 ZNF878C9JN71 531 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 H3BQ15 152 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 CDC14BO60729 498 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 CFIP05156 583 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 RGS19P49795 217 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 UBE2KP61086 200 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 NKX6-1P78426 367 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 ELOBQ15370 118 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 TMEM176BQ3YBM2 270 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 OR5D14Q8NGL3 314 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 MAFAQ8NHW3 353 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 GALNT14Q96FL9 552 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 MRPL13Q9BYD1 178 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 ADAMTS9Q9P2N4 1935 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 SEC14L6B5MCN3 397 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 ZNF587BE7ETH6 402 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 G3V3Y1 287 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 HCKP08631 526 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 SNRPCP09234 159 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 SUMO3P55854 103 aaPredicted RBP15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 OR2T2Q6IF00 324 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 LHFPL1Q86WI0 220 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 TGIF2LXQ8IUE1 241 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 RNASE11Q8TAA1 199 aaKnown RBP15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 MRGPRX4Q96LA9 322 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 MYO7BQ6PIF6 2116 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 TSTD3H0UI37 97 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 ZNF20P17024 532 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 UEVLDQ8IX04 471 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 HIST3H2BBQ8N257 126 aa15.45■□□□□ 0.06
SQSTM1-202ENST00000389805 PBOV1Q9GZY1 135 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms